Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_3999 |
| Number of amino acids: | 906 |
| Molecular Weight: | 95753.43 Da |
| Theoretical pI: | 8.41 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 109 | 12.03% |
| Cysteine CYS (C) | 9 | 0.99% |
| Glutamic Acid GLU (E) | 50 | 5.52% |
| Aspartic Acid ASP (D) | 48 | 5.3% |
| Glycine GLY (G) | 80 | 8.83% |
| Phynylalanine PHE (F) | 25 | 2.76% |
| Isoleucine ILE (I) | 24 | 2.65% |
| Histidine HIS (H) | 21 | 2.32% |
| Lysine LYS (K) | 46 | 5.08% |
| Methionine MET (M) | 20 | 2.21% |
| Leucine LEU (L) | 85 | 9.38% |
| Asparagine ASN (N) | 21 | 2.32% |
| Glutamine GLN (Q) | 42 | 4.64% |
| Proline PRO (P) | 86 | 9.49% |
| Serine SER (S) | 87 | 9.6% |
| Arginine ARG (R) | 56 | 6.18% |
| Threonine THR (T) | 32 | 3.53% |
| Tryptophan TRP (W) | 6 | 0.66% |
| Valine VAL (V) | 52 | 5.74% |
| Tyrosine TYR (Y) | 7 | 0.77% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4175 |
| Hydrogen | H | 6711 |
| Nitrogen | N | 1231 |
| Oxygen | O | 1292 |
| Sulphur | S | 29 |
| Formula | C4175H6711N1231O1292S29 |
| Total Number of Atoms: | 13438 |
| Total number of positively charged residues (ARG + LYS): | 102 |
| Total number of negatively charged residues (ASP + GLU): | 98 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 43930 Absorption 0.1% (=1 g/l) 0.459, assuming all pairs of CYS residues form cystines Ext. coefficient 43430 Absorption 0.1% (=1 g/l) 0.454, assuming all CYS residues are reduced |
| Aromaticity: | 0.042 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 60.38 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [21.96, 30.24, 29.14] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.596 |
| Grand average of hydropathicity (GRAVY): | -0.40 |