Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_2079 |
| Number of amino acids: | 118 |
| Molecular Weight: | 13092.04 Da |
| Theoretical pI: | 8.75 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 4 | 3.39% |
| Cysteine CYS (C) | 10 | 8.47% |
| Glutamic Acid GLU (E) | 4 | 3.39% |
| Aspartic Acid ASP (D) | 5 | 4.24% |
| Glycine GLY (G) | 16 | 13.56% |
| Phynylalanine PHE (F) | 3 | 2.54% |
| Isoleucine ILE (I) | 7 | 5.93% |
| Histidine HIS (H) | 0 | 0% |
| Lysine LYS (K) | 6 | 5.08% |
| Methionine MET (M) | 2 | 1.69% |
| Leucine LEU (L) | 8 | 6.78% |
| Asparagine ASN (N) | 6 | 5.08% |
| Glutamine GLN (Q) | 10 | 8.47% |
| Proline PRO (P) | 9 | 7.63% |
| Serine SER (S) | 5 | 4.24% |
| Arginine ARG (R) | 8 | 6.78% |
| Threonine THR (T) | 4 | 3.39% |
| Tryptophan TRP (W) | 5 | 4.24% |
| Valine VAL (V) | 4 | 3.39% |
| Tyrosine TYR (Y) | 2 | 1.69% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 568 |
| Hydrogen | H | 887 |
| Nitrogen | N | 169 |
| Oxygen | O | 164 |
| Sulphur | S | 12 |
| Formula | C568H887N169O164S12 |
| Total Number of Atoms: | 1800 |
| Total number of positively charged residues (ARG + LYS): | 14 |
| Total number of negatively charged residues (ASP + GLU): | 9 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 31105 Absorption 0.1% (=1 g/l) 2.376, assuming all pairs of CYS residues form cystines Ext. coefficient 30480 Absorption 0.1% (=1 g/l) 2.328, assuming all CYS residues are reduced |
| Aromaticity: | 0.085 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 46.26 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.58, 30.51, 15.25] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 62.7966 |
| Grand average of hydropathicity (GRAVY): | -0.50 |