Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1511 |
| Number of amino acids: | 180 |
| Molecular Weight: | 19343.01 Da |
| Theoretical pI: | 8.97 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 15 | 8.33% |
| Cysteine CYS (C) | 14 | 7.78% |
| Glutamic Acid GLU (E) | 4 | 2.22% |
| Aspartic Acid ASP (D) | 5 | 2.78% |
| Glycine GLY (G) | 23 | 12.78% |
| Phynylalanine PHE (F) | 8 | 4.44% |
| Isoleucine ILE (I) | 8 | 4.44% |
| Histidine HIS (H) | 2 | 1.11% |
| Lysine LYS (K) | 9 | 5% |
| Methionine MET (M) | 2 | 1.11% |
| Leucine LEU (L) | 8 | 4.44% |
| Asparagine ASN (N) | 13 | 7.22% |
| Glutamine GLN (Q) | 7 | 3.89% |
| Proline PRO (P) | 13 | 7.22% |
| Serine SER (S) | 6 | 3.33% |
| Arginine ARG (R) | 9 | 5% |
| Threonine THR (T) | 18 | 10% |
| Tryptophan TRP (W) | 5 | 2.78% |
| Valine VAL (V) | 6 | 3.33% |
| Tyrosine TYR (Y) | 5 | 2.78% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 843 |
| Hydrogen | H | 1295 |
| Nitrogen | N | 245 |
| Oxygen | O | 248 |
| Sulphur | S | 16 |
| Formula | C843H1295N245O248S16 |
| Total Number of Atoms: | 2647 |
| Total number of positively charged residues (ARG + LYS): | 18 |
| Total number of negatively charged residues (ASP + GLU): | 9 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 35825 Absorption 0.1% (=1 g/l) 1.852, assuming all pairs of CYS residues form cystines Ext. coefficient 34950 Absorption 0.1% (=1 g/l) 1.807, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.57 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [22.22, 30.56, 16.11] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 52.6666 |
| Grand average of hydropathicity (GRAVY): | -0.34 |