Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1493 |
| Number of amino acids: | 243 |
| Molecular Weight: | 26095.12 Da |
| Theoretical pI: | 8.65 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 35 | 14.4% |
| Cysteine CYS (C) | 7 | 2.88% |
| Glutamic Acid GLU (E) | 3 | 1.23% |
| Aspartic Acid ASP (D) | 16 | 6.58% |
| Glycine GLY (G) | 29 | 11.93% |
| Phynylalanine PHE (F) | 13 | 5.35% |
| Isoleucine ILE (I) | 10 | 4.12% |
| Histidine HIS (H) | 6 | 2.47% |
| Lysine LYS (K) | 8 | 3.29% |
| Methionine MET (M) | 2 | 0.82% |
| Leucine LEU (L) | 11 | 4.53% |
| Asparagine ASN (N) | 9 | 3.7% |
| Glutamine GLN (Q) | 9 | 3.7% |
| Proline PRO (P) | 14 | 5.76% |
| Serine SER (S) | 14 | 5.76% |
| Arginine ARG (R) | 15 | 6.17% |
| Threonine THR (T) | 14 | 5.76% |
| Tryptophan TRP (W) | 6 | 2.47% |
| Valine VAL (V) | 10 | 4.12% |
| Tyrosine TYR (Y) | 12 | 4.94% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1163 |
| Hydrogen | H | 1734 |
| Nitrogen | N | 332 |
| Oxygen | O | 340 |
| Sulphur | S | 9 |
| Formula | C1163H1734N332O340S9 |
| Total Number of Atoms: | 3578 |
| Total number of positively charged residues (ARG + LYS): | 23 |
| Total number of negatively charged residues (ASP + GLU): | 19 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 51255 Absorption 0.1% (=1 g/l) 1.964, assuming all pairs of CYS residues form cystines Ext. coefficient 50880 Absorption 0.1% (=1 g/l) 1.950, assuming all CYS residues are reduced |
| Aromaticity: | 0.128 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.96 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.51, 27.16, 20.99] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 60.0412 |
| Grand average of hydropathicity (GRAVY): | -0.30 |