Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1471 |
| Number of amino acids: | 191 |
| Molecular Weight: | 20690.84 Da |
| Theoretical pI: | 6.83 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 15 | 7.85% |
| Cysteine CYS (C) | 14 | 7.33% |
| Glutamic Acid GLU (E) | 2 | 1.05% |
| Aspartic Acid ASP (D) | 13 | 6.81% |
| Glycine GLY (G) | 23 | 12.04% |
| Phynylalanine PHE (F) | 5 | 2.62% |
| Isoleucine ILE (I) | 6 | 3.14% |
| Histidine HIS (H) | 2 | 1.05% |
| Lysine LYS (K) | 4 | 2.09% |
| Methionine MET (M) | 2 | 1.05% |
| Leucine LEU (L) | 7 | 3.66% |
| Asparagine ASN (N) | 14 | 7.33% |
| Glutamine GLN (Q) | 13 | 6.81% |
| Proline PRO (P) | 9 | 4.71% |
| Serine SER (S) | 14 | 7.33% |
| Arginine ARG (R) | 11 | 5.76% |
| Threonine THR (T) | 11 | 5.76% |
| Tryptophan TRP (W) | 5 | 2.62% |
| Valine VAL (V) | 11 | 5.76% |
| Tyrosine TYR (Y) | 10 | 5.24% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 882 |
| Hydrogen | H | 1332 |
| Nitrogen | N | 264 |
| Oxygen | O | 284 |
| Sulphur | S | 16 |
| Formula | C882H1332N264O284S16 |
| Total Number of Atoms: | 2778 |
| Total number of positively charged residues (ARG + LYS): | 15 |
| Total number of negatively charged residues (ASP + GLU): | 15 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 43275 Absorption 0.1% (=1 g/l) 2.092, assuming all pairs of CYS residues form cystines Ext. coefficient 42400 Absorption 0.1% (=1 g/l) 2.049, assuming all CYS residues are reduced |
| Aromaticity: | 0.105 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 23.28 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.04, 31.41, 13.61] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 51.0995 |
| Grand average of hydropathicity (GRAVY): | -0.52 |