Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1429 |
| Number of amino acids: | 214 |
| Molecular Weight: | 22079.62 Da |
| Theoretical pI: | 4.9 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 25 | 11.68% |
| Cysteine CYS (C) | 14 | 6.54% |
| Glutamic Acid GLU (E) | 10 | 4.67% |
| Aspartic Acid ASP (D) | 11 | 5.14% |
| Glycine GLY (G) | 24 | 11.22% |
| Phynylalanine PHE (F) | 10 | 4.67% |
| Isoleucine ILE (I) | 8 | 3.74% |
| Histidine HIS (H) | 0 | 0% |
| Lysine LYS (K) | 14 | 6.54% |
| Methionine MET (M) | 1 | 0.47% |
| Leucine LEU (L) | 7 | 3.27% |
| Asparagine ASN (N) | 12 | 5.61% |
| Glutamine GLN (Q) | 3 | 1.4% |
| Proline PRO (P) | 17 | 7.94% |
| Serine SER (S) | 16 | 7.48% |
| Arginine ARG (R) | 3 | 1.4% |
| Threonine THR (T) | 21 | 9.81% |
| Tryptophan TRP (W) | 3 | 1.4% |
| Valine VAL (V) | 9 | 4.21% |
| Tyrosine TYR (Y) | 6 | 2.8% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 958 |
| Hydrogen | H | 1469 |
| Nitrogen | N | 255 |
| Oxygen | O | 315 |
| Sulphur | S | 15 |
| Formula | C958H1469N255O315S15 |
| Total Number of Atoms: | 3012 |
| Total number of positively charged residues (ARG + LYS): | 17 |
| Total number of negatively charged residues (ASP + GLU): | 21 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 26315 Absorption 0.1% (=1 g/l) 1.192, assuming all pairs of CYS residues form cystines Ext. coefficient 25440 Absorption 0.1% (=1 g/l) 1.152, assuming all CYS residues are reduced |
| Aromaticity: | 0.089 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.65 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [20.09, 32.24, 20.09] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 51.2149 |
| Grand average of hydropathicity (GRAVY): | -0.27 |