Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1417 |
| Number of amino acids: | 255 |
| Molecular Weight: | 25501.63 Da |
| Theoretical pI: | 5.82 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 43 | 16.86% |
| Cysteine CYS (C) | 14 | 5.49% |
| Glutamic Acid GLU (E) | 2 | 0.78% |
| Aspartic Acid ASP (D) | 13 | 5.1% |
| Glycine GLY (G) | 31 | 12.16% |
| Phynylalanine PHE (F) | 9 | 3.53% |
| Isoleucine ILE (I) | 2 | 0.78% |
| Histidine HIS (H) | 3 | 1.18% |
| Lysine LYS (K) | 2 | 0.78% |
| Methionine MET (M) | 3 | 1.18% |
| Leucine LEU (L) | 18 | 7.06% |
| Asparagine ASN (N) | 6 | 2.35% |
| Glutamine GLN (Q) | 6 | 2.35% |
| Proline PRO (P) | 18 | 7.06% |
| Serine SER (S) | 26 | 10.2% |
| Arginine ARG (R) | 11 | 4.31% |
| Threonine THR (T) | 16 | 6.27% |
| Tryptophan TRP (W) | 3 | 1.18% |
| Valine VAL (V) | 20 | 7.84% |
| Tyrosine TYR (Y) | 9 | 3.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1107 |
| Hydrogen | H | 1707 |
| Nitrogen | N | 311 |
| Oxygen | O | 349 |
| Sulphur | S | 17 |
| Formula | C1107H1707N311O349S17 |
| Total Number of Atoms: | 3491 |
| Total number of positively charged residues (ARG + LYS): | 13 |
| Total number of negatively charged residues (ASP + GLU): | 15 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 30785 Absorption 0.1% (=1 g/l) 1.207, assuming all pairs of CYS residues form cystines Ext. coefficient 29910 Absorption 0.1% (=1 g/l) 1.173, assuming all CYS residues are reduced |
| Aromaticity: | 0.082 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 50.76 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.92, 31.76, 25.88] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.196 |
| Grand average of hydropathicity (GRAVY): | 0.22 |