Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1370 |
| Number of amino acids: | 175 |
| Molecular Weight: | 18732 Da |
| Theoretical pI: | 5.51 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 9 | 5.14% |
| Cysteine CYS (C) | 12 | 6.86% |
| Glutamic Acid GLU (E) | 2 | 1.14% |
| Aspartic Acid ASP (D) | 11 | 6.29% |
| Glycine GLY (G) | 20 | 11.43% |
| Phynylalanine PHE (F) | 8 | 4.57% |
| Isoleucine ILE (I) | 11 | 6.29% |
| Histidine HIS (H) | 2 | 1.14% |
| Lysine LYS (K) | 3 | 1.71% |
| Methionine MET (M) | 3 | 1.71% |
| Leucine LEU (L) | 11 | 6.29% |
| Asparagine ASN (N) | 13 | 7.43% |
| Glutamine GLN (Q) | 9 | 5.14% |
| Proline PRO (P) | 11 | 6.29% |
| Serine SER (S) | 17 | 9.71% |
| Arginine ARG (R) | 8 | 4.57% |
| Threonine THR (T) | 11 | 6.29% |
| Tryptophan TRP (W) | 3 | 1.71% |
| Valine VAL (V) | 7 | 4% |
| Tyrosine TYR (Y) | 4 | 2.29% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 805 |
| Hydrogen | H | 1241 |
| Nitrogen | N | 231 |
| Oxygen | O | 256 |
| Sulphur | S | 15 |
| Formula | C805H1241N231O256S15 |
| Total Number of Atoms: | 2548 |
| Total number of positively charged residues (ARG + LYS): | 11 |
| Total number of negatively charged residues (ASP + GLU): | 13 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 23210 Absorption 0.1% (=1 g/l) 1.239, assuming all pairs of CYS residues form cystines Ext. coefficient 22460 Absorption 0.1% (=1 g/l) 1.199, assuming all CYS residues are reduced |
| Aromaticity: | 0.086 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.67 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.14, 34.86, 14.29] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 65.7714 |
| Grand average of hydropathicity (GRAVY): | -0.21 |