Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1362 |
| Number of amino acids: | 249 |
| Molecular Weight: | 27486.05 Da |
| Theoretical pI: | 6.89 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 12 | 4.82% |
| Cysteine CYS (C) | 17 | 6.83% |
| Glutamic Acid GLU (E) | 8 | 3.21% |
| Aspartic Acid ASP (D) | 10 | 4.02% |
| Glycine GLY (G) | 28 | 11.25% |
| Phynylalanine PHE (F) | 15 | 6.02% |
| Isoleucine ILE (I) | 7 | 2.81% |
| Histidine HIS (H) | 5 | 2.01% |
| Lysine LYS (K) | 8 | 3.21% |
| Methionine MET (M) | 5 | 2.01% |
| Leucine LEU (L) | 13 | 5.22% |
| Asparagine ASN (N) | 14 | 5.62% |
| Glutamine GLN (Q) | 9 | 3.61% |
| Proline PRO (P) | 22 | 8.84% |
| Serine SER (S) | 13 | 5.22% |
| Arginine ARG (R) | 10 | 4.02% |
| Threonine THR (T) | 24 | 9.64% |
| Tryptophan TRP (W) | 9 | 3.61% |
| Valine VAL (V) | 11 | 4.42% |
| Tyrosine TYR (Y) | 9 | 3.61% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1222 |
| Hydrogen | H | 1801 |
| Nitrogen | N | 329 |
| Oxygen | O | 355 |
| Sulphur | S | 22 |
| Formula | C1222H1801N329O355S22 |
| Total Number of Atoms: | 3729 |
| Total number of positively charged residues (ARG + LYS): | 18 |
| Total number of negatively charged residues (ASP + GLU): | 18 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 63910 Absorption 0.1% (=1 g/l) 2.325, assuming all pairs of CYS residues form cystines Ext. coefficient 62910 Absorption 0.1% (=1 g/l) 2.289, assuming all CYS residues are reduced |
| Aromaticity: | 0.133 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.31 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.70, 30.92, 15.26] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 48.9558 |
| Grand average of hydropathicity (GRAVY): | -0.35 |