Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1338 |
| Number of amino acids: | 245 |
| Molecular Weight: | 26437.7 Da |
| Theoretical pI: | 8.48 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 5.71% |
| Cysteine CYS (C) | 19 | 7.76% |
| Glutamic Acid GLU (E) | 7 | 2.86% |
| Aspartic Acid ASP (D) | 12 | 4.9% |
| Glycine GLY (G) | 25 | 10.2% |
| Phynylalanine PHE (F) | 11 | 4.49% |
| Isoleucine ILE (I) | 11 | 4.49% |
| Histidine HIS (H) | 5 | 2.04% |
| Lysine LYS (K) | 15 | 6.12% |
| Methionine MET (M) | 5 | 2.04% |
| Leucine LEU (L) | 21 | 8.57% |
| Asparagine ASN (N) | 10 | 4.08% |
| Glutamine GLN (Q) | 6 | 2.45% |
| Proline PRO (P) | 14 | 5.71% |
| Serine SER (S) | 17 | 6.94% |
| Arginine ARG (R) | 10 | 4.08% |
| Threonine THR (T) | 15 | 6.12% |
| Tryptophan TRP (W) | 3 | 1.22% |
| Valine VAL (V) | 19 | 7.76% |
| Tyrosine TYR (Y) | 6 | 2.45% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1161 |
| Hydrogen | H | 1833 |
| Nitrogen | N | 319 |
| Oxygen | O | 338 |
| Sulphur | S | 24 |
| Formula | C1161H1833N319O338S24 |
| Total Number of Atoms: | 3675 |
| Total number of positively charged residues (ARG + LYS): | 25 |
| Total number of negatively charged residues (ASP + GLU): | 19 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 26565 Absorption 0.1% (=1 g/l) 1.005, assuming all pairs of CYS residues form cystines Ext. coefficient 25440 Absorption 0.1% (=1 g/l) 0.962, assuming all CYS residues are reduced |
| Aromaticity: | 0.082 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.62 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.98, 26.94, 19.18] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.1429 |
| Grand average of hydropathicity (GRAVY): | 0.05 |