Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1335 |
| Number of amino acids: | 244 |
| Molecular Weight: | 25669.41 Da |
| Theoretical pI: | 7.39 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 6.56% |
| Cysteine CYS (C) | 17 | 6.97% |
| Glutamic Acid GLU (E) | 8 | 3.28% |
| Aspartic Acid ASP (D) | 8 | 3.28% |
| Glycine GLY (G) | 29 | 11.89% |
| Phynylalanine PHE (F) | 10 | 4.1% |
| Isoleucine ILE (I) | 12 | 4.92% |
| Histidine HIS (H) | 4 | 1.64% |
| Lysine LYS (K) | 10 | 4.1% |
| Methionine MET (M) | 4 | 1.64% |
| Leucine LEU (L) | 21 | 8.61% |
| Asparagine ASN (N) | 13 | 5.33% |
| Glutamine GLN (Q) | 7 | 2.87% |
| Proline PRO (P) | 15 | 6.15% |
| Serine SER (S) | 26 | 10.66% |
| Arginine ARG (R) | 7 | 2.87% |
| Threonine THR (T) | 10 | 4.1% |
| Tryptophan TRP (W) | 3 | 1.23% |
| Valine VAL (V) | 17 | 6.97% |
| Tyrosine TYR (Y) | 7 | 2.87% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1124 |
| Hydrogen | H | 1756 |
| Nitrogen | N | 306 |
| Oxygen | O | 340 |
| Sulphur | S | 21 |
| Formula | C1124H1756N306O340S21 |
| Total Number of Atoms: | 3547 |
| Total number of positively charged residues (ARG + LYS): | 17 |
| Total number of negatively charged residues (ASP + GLU): | 16 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 27930 Absorption 0.1% (=1 g/l) 1.088, assuming all pairs of CYS residues form cystines Ext. coefficient 26930 Absorption 0.1% (=1 g/l) 1.049, assuming all CYS residues are reduced |
| Aromaticity: | 0.082 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.91 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.69, 34.02, 20.08] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.5082 |
| Grand average of hydropathicity (GRAVY): | 0.11 |