Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1327 |
| Number of amino acids: | 244 |
| Molecular Weight: | 25910.41 Da |
| Theoretical pI: | 9.95 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 29 | 11.89% |
| Cysteine CYS (C) | 4 | 1.64% |
| Glutamic Acid GLU (E) | 13 | 5.33% |
| Aspartic Acid ASP (D) | 9 | 3.69% |
| Glycine GLY (G) | 26 | 10.66% |
| Phynylalanine PHE (F) | 8 | 3.28% |
| Isoleucine ILE (I) | 1 | 0.41% |
| Histidine HIS (H) | 2 | 0.82% |
| Lysine LYS (K) | 9 | 3.69% |
| Methionine MET (M) | 2 | 0.82% |
| Leucine LEU (L) | 26 | 10.66% |
| Asparagine ASN (N) | 5 | 2.05% |
| Glutamine GLN (Q) | 7 | 2.87% |
| Proline PRO (P) | 28 | 11.48% |
| Serine SER (S) | 19 | 7.79% |
| Arginine ARG (R) | 23 | 9.43% |
| Threonine THR (T) | 15 | 6.15% |
| Tryptophan TRP (W) | 5 | 2.05% |
| Valine VAL (V) | 11 | 4.51% |
| Tyrosine TYR (Y) | 2 | 0.82% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1140 |
| Hydrogen | H | 1815 |
| Nitrogen | N | 343 |
| Oxygen | O | 337 |
| Sulphur | S | 6 |
| Formula | C1140H1815N343O337S6 |
| Total Number of Atoms: | 3641 |
| Total number of positively charged residues (ARG + LYS): | 32 |
| Total number of negatively charged residues (ASP + GLU): | 22 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 30730 Absorption 0.1% (=1 g/l) 1.186, assuming all pairs of CYS residues form cystines Ext. coefficient 30480 Absorption 0.1% (=1 g/l) 1.176, assuming all CYS residues are reduced |
| Aromaticity: | 0.061 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 64.76 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [21.72, 31.97, 28.69] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 68.1146 |
| Grand average of hydropathicity (GRAVY): | -0.47 |