Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1314 |
| Number of amino acids: | 210 |
| Molecular Weight: | 22753.63 Da |
| Theoretical pI: | 8.24 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 18 | 8.57% |
| Cysteine CYS (C) | 12 | 5.71% |
| Glutamic Acid GLU (E) | 1 | 0.48% |
| Aspartic Acid ASP (D) | 9 | 4.29% |
| Glycine GLY (G) | 24 | 11.43% |
| Phynylalanine PHE (F) | 13 | 6.19% |
| Isoleucine ILE (I) | 5 | 2.38% |
| Histidine HIS (H) | 2 | 0.95% |
| Lysine LYS (K) | 5 | 2.38% |
| Methionine MET (M) | 5 | 2.38% |
| Leucine LEU (L) | 14 | 6.67% |
| Asparagine ASN (N) | 20 | 9.52% |
| Glutamine GLN (Q) | 7 | 3.33% |
| Proline PRO (P) | 17 | 8.1% |
| Serine SER (S) | 11 | 5.24% |
| Arginine ARG (R) | 8 | 3.81% |
| Threonine THR (T) | 15 | 7.14% |
| Tryptophan TRP (W) | 4 | 1.9% |
| Valine VAL (V) | 8 | 3.81% |
| Tyrosine TYR (Y) | 12 | 5.71% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1010 |
| Hydrogen | H | 1492 |
| Nitrogen | N | 274 |
| Oxygen | O | 296 |
| Sulphur | S | 17 |
| Formula | C1010H1492N274O296S17 |
| Total Number of Atoms: | 3089 |
| Total number of positively charged residues (ARG + LYS): | 13 |
| Total number of negatively charged residues (ASP + GLU): | 10 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 40630 Absorption 0.1% (=1 g/l) 1.786, assuming all pairs of CYS residues form cystines Ext. coefficient 39880 Absorption 0.1% (=1 g/l) 1.753, assuming all CYS residues are reduced |
| Aromaticity: | 0.138 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 17.89 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.67, 34.29, 18.10] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 54.9048 |
| Grand average of hydropathicity (GRAVY): | -0.23 |