Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1272 |
| Number of amino acids: | 154 |
| Molecular Weight: | 16366.15 Da |
| Theoretical pI: | 4.79 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 11 | 7.14% |
| Cysteine CYS (C) | 9 | 5.84% |
| Glutamic Acid GLU (E) | 2 | 1.3% |
| Aspartic Acid ASP (D) | 9 | 5.84% |
| Glycine GLY (G) | 16 | 10.39% |
| Phynylalanine PHE (F) | 8 | 5.19% |
| Isoleucine ILE (I) | 5 | 3.25% |
| Histidine HIS (H) | 1 | 0.65% |
| Lysine LYS (K) | 5 | 3.25% |
| Methionine MET (M) | 1 | 0.65% |
| Leucine LEU (L) | 9 | 5.84% |
| Asparagine ASN (N) | 16 | 10.39% |
| Glutamine GLN (Q) | 6 | 3.9% |
| Proline PRO (P) | 12 | 7.79% |
| Serine SER (S) | 9 | 5.84% |
| Arginine ARG (R) | 3 | 1.95% |
| Threonine THR (T) | 18 | 11.69% |
| Tryptophan TRP (W) | 4 | 2.6% |
| Valine VAL (V) | 7 | 4.55% |
| Tyrosine TYR (Y) | 3 | 1.95% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 712 |
| Hydrogen | H | 1076 |
| Nitrogen | N | 196 |
| Oxygen | O | 229 |
| Sulphur | S | 10 |
| Formula | C712H1076N196O229S10 |
| Total Number of Atoms: | 2223 |
| Total number of positively charged residues (ARG + LYS): | 8 |
| Total number of negatively charged residues (ASP + GLU): | 11 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 26970 Absorption 0.1% (=1 g/l) 1.648, assuming all pairs of CYS residues form cystines Ext. coefficient 26470 Absorption 0.1% (=1 g/l) 1.617, assuming all CYS residues are reduced |
| Aromaticity: | 0.097 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 28.36 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.38, 34.42, 14.94] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 55.7792 |
| Grand average of hydropathicity (GRAVY): | -0.34 |