Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1177 |
| Number of amino acids: | 181 |
| Molecular Weight: | 18816.06 Da |
| Theoretical pI: | 4.11 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 7.73% |
| Cysteine CYS (C) | 10 | 5.52% |
| Glutamic Acid GLU (E) | 1 | 0.55% |
| Aspartic Acid ASP (D) | 11 | 6.08% |
| Glycine GLY (G) | 23 | 12.71% |
| Phynylalanine PHE (F) | 6 | 3.31% |
| Isoleucine ILE (I) | 8 | 4.42% |
| Histidine HIS (H) | 1 | 0.55% |
| Lysine LYS (K) | 3 | 1.66% |
| Methionine MET (M) | 3 | 1.66% |
| Leucine LEU (L) | 12 | 6.63% |
| Asparagine ASN (N) | 8 | 4.42% |
| Glutamine GLN (Q) | 10 | 5.52% |
| Proline PRO (P) | 11 | 6.08% |
| Serine SER (S) | 16 | 8.84% |
| Arginine ARG (R) | 2 | 1.1% |
| Threonine THR (T) | 17 | 9.39% |
| Tryptophan TRP (W) | 3 | 1.66% |
| Valine VAL (V) | 13 | 7.18% |
| Tyrosine TYR (Y) | 9 | 4.97% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 824 |
| Hydrogen | H | 1253 |
| Nitrogen | N | 213 |
| Oxygen | O | 266 |
| Sulphur | S | 13 |
| Formula | C824H1253N213O266S13 |
| Total Number of Atoms: | 2569 |
| Total number of positively charged residues (ARG + LYS): | 5 |
| Total number of negatively charged residues (ASP + GLU): | 12 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 30535 Absorption 0.1% (=1 g/l) 1.623, assuming all pairs of CYS residues form cystines Ext. coefficient 29910 Absorption 0.1% (=1 g/l) 1.590, assuming all CYS residues are reduced |
| Aromaticity: | 0.099 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.27 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.18, 32.04, 16.57] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 71.6574 |
| Grand average of hydropathicity (GRAVY): | 0.08 |