Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1148 |
| Number of amino acids: | 121 |
| Molecular Weight: | 12391.15 Da |
| Theoretical pI: | 5.24 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 13.22% |
| Cysteine CYS (C) | 12 | 9.92% |
| Glutamic Acid GLU (E) | 5 | 4.13% |
| Aspartic Acid ASP (D) | 5 | 4.13% |
| Glycine GLY (G) | 8 | 6.61% |
| Phynylalanine PHE (F) | 2 | 1.65% |
| Isoleucine ILE (I) | 5 | 4.13% |
| Histidine HIS (H) | 0 | 0% |
| Lysine LYS (K) | 6 | 4.96% |
| Methionine MET (M) | 1 | 0.83% |
| Leucine LEU (L) | 10 | 8.26% |
| Asparagine ASN (N) | 6 | 4.96% |
| Glutamine GLN (Q) | 4 | 3.31% |
| Proline PRO (P) | 3 | 2.48% |
| Serine SER (S) | 14 | 11.57% |
| Arginine ARG (R) | 3 | 2.48% |
| Threonine THR (T) | 10 | 8.26% |
| Tryptophan TRP (W) | 1 | 0.83% |
| Valine VAL (V) | 9 | 7.44% |
| Tyrosine TYR (Y) | 1 | 0.83% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 518 |
| Hydrogen | H | 855 |
| Nitrogen | N | 147 |
| Oxygen | O | 177 |
| Sulphur | S | 13 |
| Formula | C518H855N147O177S13 |
| Total Number of Atoms: | 1710 |
| Total number of positively charged residues (ARG + LYS): | 9 |
| Total number of negatively charged residues (ASP + GLU): | 10 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 7740 Absorption 0.1% (=1 g/l) 0.625, assuming all pairs of CYS residues form cystines Ext. coefficient 6990 Absorption 0.1% (=1 g/l) 0.564, assuming all CYS residues are reduced |
| Aromaticity: | 0.033 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.62 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.14, 25.62, 26.45] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.1404 |
| Grand average of hydropathicity (GRAVY): | 0.24 |