Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1137 |
| Number of amino acids: | 242 |
| Molecular Weight: | 25476.52 Da |
| Theoretical pI: | 4.51 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 9.09% |
| Cysteine CYS (C) | 16 | 6.61% |
| Glutamic Acid GLU (E) | 4 | 1.65% |
| Aspartic Acid ASP (D) | 12 | 4.96% |
| Glycine GLY (G) | 20 | 8.26% |
| Phynylalanine PHE (F) | 15 | 6.2% |
| Isoleucine ILE (I) | 5 | 2.07% |
| Histidine HIS (H) | 1 | 0.41% |
| Lysine LYS (K) | 6 | 2.48% |
| Methionine MET (M) | 2 | 0.83% |
| Leucine LEU (L) | 18 | 7.44% |
| Asparagine ASN (N) | 10 | 4.13% |
| Glutamine GLN (Q) | 10 | 4.13% |
| Proline PRO (P) | 16 | 6.61% |
| Serine SER (S) | 31 | 12.81% |
| Arginine ARG (R) | 4 | 1.65% |
| Threonine THR (T) | 23 | 9.5% |
| Tryptophan TRP (W) | 4 | 1.65% |
| Valine VAL (V) | 14 | 5.79% |
| Tyrosine TYR (Y) | 9 | 3.72% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1121 |
| Hydrogen | H | 1688 |
| Nitrogen | N | 286 |
| Oxygen | O | 358 |
| Sulphur | S | 18 |
| Formula | C1121H1688N286O358S18 |
| Total Number of Atoms: | 3471 |
| Total number of positively charged residues (ARG + LYS): | 10 |
| Total number of negatively charged residues (ASP + GLU): | 16 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 36410 Absorption 0.1% (=1 g/l) 1.429, assuming all pairs of CYS residues form cystines Ext. coefficient 35410 Absorption 0.1% (=1 g/l) 1.390, assuming all CYS residues are reduced |
| Aromaticity: | 0.116 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.31 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.86, 31.82, 19.01] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 62.9339 |
| Grand average of hydropathicity (GRAVY): | 0.06 |