Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1052 |
| Number of amino acids: | 255 |
| Molecular Weight: | 26607.53 Da |
| Theoretical pI: | 4.47 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 20 | 7.84% |
| Cysteine CYS (C) | 18 | 7.06% |
| Glutamic Acid GLU (E) | 11 | 4.31% |
| Aspartic Acid ASP (D) | 13 | 5.1% |
| Glycine GLY (G) | 29 | 11.37% |
| Phynylalanine PHE (F) | 16 | 6.27% |
| Isoleucine ILE (I) | 3 | 1.18% |
| Histidine HIS (H) | 1 | 0.39% |
| Lysine LYS (K) | 8 | 3.14% |
| Methionine MET (M) | 4 | 1.57% |
| Leucine LEU (L) | 17 | 6.67% |
| Asparagine ASN (N) | 7 | 2.75% |
| Glutamine GLN (Q) | 5 | 1.96% |
| Proline PRO (P) | 13 | 5.1% |
| Serine SER (S) | 39 | 15.29% |
| Arginine ARG (R) | 6 | 2.35% |
| Threonine THR (T) | 19 | 7.45% |
| Tryptophan TRP (W) | 3 | 1.18% |
| Valine VAL (V) | 13 | 5.1% |
| Tyrosine TYR (Y) | 10 | 3.92% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1152 |
| Hydrogen | H | 1734 |
| Nitrogen | N | 298 |
| Oxygen | O | 384 |
| Sulphur | S | 22 |
| Formula | C1152H1734N298O384S22 |
| Total Number of Atoms: | 3590 |
| Total number of positively charged residues (ARG + LYS): | 14 |
| Total number of negatively charged residues (ASP + GLU): | 24 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 32525 Absorption 0.1% (=1 g/l) 1.222, assuming all pairs of CYS residues form cystines Ext. coefficient 31400 Absorption 0.1% (=1 g/l) 1.180, assuming all CYS residues are reduced |
| Aromaticity: | 0.114 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 49.34 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.31, 34.51, 20.39] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 53.2157 |
| Grand average of hydropathicity (GRAVY): | -0.06 |