Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_1031 |
| Number of amino acids: | 242 |
| Molecular Weight: | 24664.59 Da |
| Theoretical pI: | 4.43 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 13.64% |
| Cysteine CYS (C) | 16 | 6.61% |
| Glutamic Acid GLU (E) | 11 | 4.55% |
| Aspartic Acid ASP (D) | 11 | 4.55% |
| Glycine GLY (G) | 32 | 13.22% |
| Phynylalanine PHE (F) | 10 | 4.13% |
| Isoleucine ILE (I) | 8 | 3.31% |
| Histidine HIS (H) | 0 | 0% |
| Lysine LYS (K) | 4 | 1.65% |
| Methionine MET (M) | 5 | 2.07% |
| Leucine LEU (L) | 13 | 5.37% |
| Asparagine ASN (N) | 4 | 1.65% |
| Glutamine GLN (Q) | 4 | 1.65% |
| Proline PRO (P) | 14 | 5.79% |
| Serine SER (S) | 26 | 10.74% |
| Arginine ARG (R) | 9 | 3.72% |
| Threonine THR (T) | 18 | 7.44% |
| Tryptophan TRP (W) | 4 | 1.65% |
| Valine VAL (V) | 11 | 4.55% |
| Tyrosine TYR (Y) | 9 | 3.72% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1065 |
| Hydrogen | H | 1627 |
| Nitrogen | N | 285 |
| Oxygen | O | 348 |
| Sulphur | S | 21 |
| Formula | C1065H1627N285O348S21 |
| Total Number of Atoms: | 3346 |
| Total number of positively charged residues (ARG + LYS): | 13 |
| Total number of negatively charged residues (ASP + GLU): | 22 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 36410 Absorption 0.1% (=1 g/l) 1.476, assuming all pairs of CYS residues form cystines Ext. coefficient 35410 Absorption 0.1% (=1 g/l) 1.436, assuming all CYS residues are reduced |
| Aromaticity: | 0.095 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 49.59 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [22.73, 31.41, 25.62] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 60.6612 |
| Grand average of hydropathicity (GRAVY): | 0.10 |