Detailed Peptide Information

This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking

Primary Information
PPepDB ID	PPepDB_5296
Peptide Name	Y5994_ARATH
PMID(s)	--NA--
Plant Source (Scientific Name)	Arabidopsis thaliana
Plant Source (Common Name)	Mouse-ear cress
Plant Family	Brassicaceae
Peptide Family	--NA--
Peptide Function	Signaling-peptide
Peptide Function Description	Coiled coil; Complete proteome; Endoplasmic reticulum; Membrane; Signal; Transmembrane | Uncharacterized protein At5g49945 precursor.Endoplasmic reticulum membrane; Single-pass membrane protein.
Activity Against	--NA--
IC50 value	--NA--
Sequence	EDEFEGLPVEIETLESPLITENGTHADPKTPDLKTSSEAQGDTNDQTKKKFNLVVPCKDEITFEVYMNEETMDHVVFAMTKKKAAKTMQKEMRDLQRFAGIVSPPAGRKWVSEEFALISESKEVAADLITDTVLDQVFGDKAVDKYGKNFKSYAVEIACVCFLIALAINYFVGKRENESLALAWAAKFASKDTIFQKNFSLSSQARNKTESGRQKAAEEAYKELHNARQEALQKKKAEKKKMMEEAEAKMLTQSHSSLSDPDPEPEPSSAECKSDLITESDLEHQSDSKTPSSTPFEYWDMLGVSELEDSPLLLKEALNVFKFYASGRRYCHGLLATMELKSRHDLISRVMSMHISDQHPGKHKKMMLFKFSLPDAKHMDDIVRLVALIPYYIDLVGRYRMSRYFSFFFLALFLHYRIIVASPFEGFDAEEDDVTDDSSHLLHHSLPPPLSAEVIRKKEAKERARQVKKAVPKMKMSRSH
Sequence Length	480
Validation	Experimental evidence at transcript level
Average Molecular Weight (Da)	54592.28
Monoisotopic Molecular Weight (Da)	54557.48
Isoelectric Point (pI)	6.03
Method / Extraction	--NA--

Secondary Information
Tertiary Structure and DSSP Report	Click to View Structure
Physico-Chemical Properties of peptides	Click to View Physico-Chemical Details of PPepDB_5296

External links (Uniprot, PDB and Source Information Database)
Uniprot	Q94CC0
NCBI	--NA--
EMBL	AB024032
Link to Source Databases	SPdb338289
Addtional Information	SEQUENCE CAUTION:Sequence=BAA97015.1; Type=Erroneous gene model prediction; Note=The predicted gene At5g49940 has been split into 2 genes: At5g49940 and At5g49945;