Detailed Peptide Information
This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking
| Primary Information |
|---|
| PPepDB ID | PPepDB_4136 |
| Peptide Name | AMP_IMPBA |
| PMID(s) | --NA-- |
| Plant Source (Scientific Name) | Impatiens balsamina |
| Plant Source (Common Name) | Garden balsam |
| Plant Family | Balsaminaceae |
| Peptide Family | --NA-- |
| Peptide Function | Signaling-peptide |
| Peptide Function Description | Antibiotic; Antimicrobial; Cleavage on pair of basic residues; Direct protein sequencing; Fungicide; Plant defense; Pyrrolidone carboxylic acid; Repeat; Secreted; Signal | Antimicrobial peptides precursor (IB-AMP) [Contains: Basic peptide,AMP3 (IB-AMP3); Basic peptide AMP1-1 (IB-AMP1-1); Basic peptide AMP1-2,(IB-AMP1-2); Basic peptide AMP1-3 (IB-AMP1-3); Basic peptide AMP2 (IB-,AMP2); Basic peptide AMP4 (IB-AMP4)].Secreted. |
| Activity Against | --NA-- |
| IC50 value | --NA-- |
| Sequence | AEEAAAFQAGEVTASLMLIMFKACPCMGPVPSVEDQWGRRCCGWGPGRRYCVRWCQNAEEAAAAIPEATEKAQEAPVYSEDQWGRRCCGWGPGRRYCVRWCQNAEEAAAAVAIPEASEKAQEGPVYSEDQWGRMVQKGVVFGVLLILFICSTLTSADSKPNPTKEEEPAKKPDEVSVKSGGPERCCGWGPGRRYCVRWCSNAADEVATPEDVEPGQYGRRCCNWGPGRRYCKRVSEDQYRHRCCAWGPGRKYCKRWCANAEEAAAAIPEASEELAQEEAPVYSWCHNAAEEATLKAFEEEAAREQPVYSEDQWGRRCCGWGPGRRYCRRWCQS |
| Sequence Length | 333 |
| Validation | Experimental evidence at protein level |
| Average Molecular Weight (Da) | 37258.81 |
| Monoisotopic Molecular Weight (Da) | 37234.22 |
| Isoelectric Point (pI) | 5.63 |
| Method / Extraction | --NA-- |
| External links (Uniprot, PDB and Source Information Database) |
|---|
| Uniprot | O24006 |
| NCBI | --NA-- |
| EMBL | Y14369 |
| Link to Source Databases | SPdb9099 |
|---|
| Addtional Information | FUNCTION:Plays a role in the defense of the germinating seed against micro-organisms, by inhibiting the growth of a range of filamentous fungi and bacteria, especially Gram-positive bacteria.Not cytotoxic for cultured human cells and are the smallest known plant-derived antimicrobial peptides. Peptide IB-AMP4 has a higher antifungal activity than IB-AMP1.DEVELOPMENTAL STAGE:Highly expressed in dry mature seed and by the stages 2-5 of developing seed. The peptide IB-AMP1 is also detected at early stages of germination (24 hours and 48 hours postgermination).DOMAIN:Contains repeated alternating basic mature peptide and acidic propeptide domains.PTM:The N-terminal of all peptides are blocked.PTM:The 4 cysteine residues of all peptides are involved in intrachain disulfide bonds.MASS SPECTROMETRY:Mass=2536.6; Method=Electrospray; Range=55-74; Source=PubMed:9305910;MASS SPECTROMETRY:Mass=2464.6; Method=Electrospray; Range=103- 122; Source=PubMed:9305910;MASS SPECTROMETRY:Mass=2527.4; Method=Electrospray; Range=233- 252; Source=PubMed:9305910;MASS SPECTROMETRY:Mass=2522.6; Method=Electrospray; Range=279- 298; Source=PubMed:9305910; |
