Detailed Peptide Information
This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking
| Primary Information |
|---|
| PPepDB ID | PPepDB_4059 |
| Peptide Name | RIP0_DIACA |
| PMID(s) | --NA-- |
| Plant Source (Scientific Name) | Dianthus caryophyllus |
| Plant Source (Common Name) | Carnation, Clove pink |
| Plant Family | Caryophyllaceae |
| Peptide Family | --NA-- |
| Peptide Function | Signaling-peptide |
| Peptide Function Description | 3D-structure; Antiviral protein; Direct protein sequencing; Hydrolase; Plant defense; Protein synthesis inhibitor; Signal; Toxin | Antiviral protein DAP-30 precursor (EC 3.2.2.22) (Ribosome-,inactivating protein) (rRNA N-glycosidase) (Dianthin 30). |
| Activity Against | --NA-- |
| IC50 value | --NA-- |
| Sequence | AARFRYIQNLVTKNFPNKFDSENKVIQFQVSWSKISTAIFGDCKNGVFNKAKITTGDQSRKELGLGINLLITMIDGVNKKVRVVKDEARFLLIAIQMTAEDYDFGFGKVRQAKDLQMGLLKYLGRPKSSSIEANSTDDTADVLLAMDNANVNRAYYFKNQITSAELTALFPEVVVANQKQLEYGEDYQAIEKNMKIYLVAAIAWILFQSSSWTTDAATAYTLNLANPSASQYSSFLDQIRNNVRDTSLIYGGTDVAVIGAPSTTDKFLRLNFQGPRGTVSLGLRRENLYVVAY |
| Sequence Length | 293 |
| Validation | Experimental evidence at protein level |
| Average Molecular Weight (Da) | 32717.27 |
| Monoisotopic Molecular Weight (Da) | 32696.93 |
| Isoelectric Point (pI) | 9.07 |
| Method / Extraction | --NA-- |
| External links (Uniprot, PDB and Source Information Database) |
|---|
| Uniprot | P24476 |
| NCBI | --NA-- |
| EMBL | X59260 |
| Link to Source Databases | SPdb221273 |
|---|
| Addtional Information | FUNCTION:Single-chain ribosome-inactivating protein.CATALYTIC ACTIVITY:Endohydrolysis of the N-glycosidic bond at one specific adenosine on the 28S rRNA.MISCELLANEOUS:Inhibits HIV-1 infection and replication.SIMILARITY:Belongs to the ribosome-inactivating protein family.Type 1 RIP subfamily. |
