Detailed Peptide Information


This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking



Primary Information
PPepDB IDPPepDB_3979
Peptide NameRoot cyclotide 1 (Vhr1)
PMID(s)15295104
Plant Source (Scientific Name)Viola hederacea
Plant Source (Common Name)Native Violet
Plant FamilyViolaceae
Peptide FamilyCyclotide
Peptide FunctionAntimicrobial
Peptide Function Description--NA--
Activity Against--NA--
IC50 value--NA--
SequenceGIPCAESCVWIPCTVTALLGCSCSNKVCYN
Sequence Length30
ValidationExperimental evidence at protein level
Average Molecular Weight (Da)3135.71
Monoisotopic Molecular Weight (Da)3133.39
Isoelectric Point (pI)5.96
Method / Extraction--NA--


Secondary Information
Tertiary Structure and DSSP ReportClick to View Structure
Physico-Chemical Properties of peptidesClick to View Physico-Chemical Details of PPepDB_3979


External links (Uniprot, PDB and Source Information Database)
UniprotP83937
NCBI--NA--
EMBL--NA--
Link to Source DatabasesPhytAMP_PHYT00209, EROP-Moscow_09072, Cybase_6, CAMPSQ3072
Addtional InformationNA