Detailed Peptide Information
This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking
| Primary Information |
|---|
| PPepDB ID | PPepDB_2994 |
| Peptide Name | Pp-AMP2 |
| PMID(s) | 15784998 |
| Plant Source (Scientific Name) | Phyllostachys pubescens |
| Plant Source (Common Name) | moso bamboo |
| Plant Family | Poaceae |
| Peptide Family | Defensin |
| Peptide Function | Antimicrobial, Antibacterial, Antifungal |
| Peptide Function Description | inhibits growth of plant patogenic fungi (IC50=2 µg/ml), and different bacteria (IC50=13-20 µg/ml). |
| Activity Against | --NA-- |
| IC50 value | --NA-- |
| Sequence | KSCCRSTTARNIYNGCRVPGTARPVCAKKSGCKIQEAKKCEPPYD |
| Sequence Length | 45 |
| Validation | Experimental evidence at protein level |
| Average Molecular Weight (Da) | 4919.72 |
| Monoisotopic Molecular Weight (Da) | 4916.39 |
| Isoelectric Point (pI) | 9.42 |
| Method / Extraction | --NA-- |
| External links (Uniprot, PDB and Source Information Database) |
|---|
| Uniprot | --NA-- |
| NCBI | --NA-- |
| EMBL | --NA-- |
| Link to Source Databases | EROP-Moscow_05774, APD_01586 |
|---|
| Addtional Information | The peptide is active against plant pathogenic Gram-positive (Clavibacter michiganensis and Curtobacterium flaccumfaciens) and Gram- bacteria (Erwinia carotovora, Agrobacterium radiobacter and A. rhizogenes) at IC50=13-25 ug/ml and fungi (Fusarium oxysporum and Geotrichum candidum) at IC50=2 ug/ml. |
