Detailed Peptide Information
This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking
| Primary Information |
|---|
| PPepDB ID | PPepDB_2992 |
| Peptide Name | Defensin Dm-AMP2 |
| PMID(s) | 7628617 |
| Plant Source (Scientific Name) | Dahlia merckii |
| Plant Source (Common Name) | dahlia |
| Plant Family | Asteraceae |
| Peptide Family | Defensin |
| Peptide Function | Antimicrobial, Antifungal |
| Peptide Function Description | is active against fungi |
| Activity Against | the peptide is active against fungi B. cinerea (IC50 10 µg/ml), C. sphaerospermum (IC50 3 µg/ml), F. culmorum (IC50 3 µg/ml), L. maculans (IC50 1.0 µg/ml), P. digitatum (IC50 2 µg/ml), S. tritici (IC50 1 µg/ml), and V. albo-atrum (IC50 2 µg/ml) |
| IC50 value | 10 µg/ml | 3 µg/ml | 3 µg/ml | 1.0 µg/ml | 2 µg/ml | 1 µg/ml | and 2 µg/ml |
| Sequence | EVCEKASKTWSGNCGNTGHC |
| Sequence Length | 20 |
| Validation | Experimental evidence at protein level |
| Average Molecular Weight (Da) | 2111.31 |
| Monoisotopic Molecular Weight (Da) | 2109.87 |
| Isoelectric Point (pI) | 6.82 |
| Method / Extraction | --NA-- |
| External links (Uniprot, PDB and Source Information Database) |
|---|
| Uniprot | --NA-- |
| NCBI | --NA-- |
| EMBL | --NA-- |
| Link to Source Databases | EROP-Moscow_03015, APD_02771 |
|---|
| Addtional Information | Warning: the sequence is not yet complete. The known N-terminal sequence differs from Dm-AMP1 only by one residue. In medium A supplemented with 1 mM CaCl2 and 50 mM KCl, Updated Jan2017. |
