Detailed Peptide Information
This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking
| Primary Information |
|---|
| PPepDB ID | PPepDB_245 |
| Peptide Name | Tomato Snakin-2 |
| PMID(s) | --NA-- |
| Plant Source (Scientific Name) | Solanum lycopersicum |
| Plant Source (Common Name) | Tomato |
| Plant Family | Solanaceae |
| Peptide Family | Snakin |
| Peptide Function | Antibacterial, Antifungal |
| Peptide Function Description | --NA-- |
| Activity Against | --NA-- |
| IC50 value | --NA-- |
| Sequence | DSYKKIDCGGACAARCRLSSRPRLCHRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP |
| Sequence Length | 66 |
| Validation | Experimental evidence at protein level |
| Average Molecular Weight (Da) | 7012.09 |
| Monoisotopic Molecular Weight (Da) | 7007.14 |
| Isoelectric Point (pI) | 9.06 |
| Method / Extraction | --NA-- |
| External links (Uniprot, PDB and Source Information Database) |
|---|
| Uniprot | --NA-- |
| NCBI | --NA-- |
| EMBL | --NA-- |
| Link to Source Databases | APD_02707 |
|---|
| Addtional Information | APD analysis reveals that the sequence of THE PEPTIDE most resembles (96.96%) potato Snakin-2, differing only in two amino acids: D1 (this entry) vs. Y1 and H26 vs. N26. Active against E. coli, B. subtilis, and S. cerevisiae (Brewer's yeast) (PeerJ 2016). |
