Detailed Peptide Information
This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking
| Primary Information |
|---|
| PPepDB ID | PPepDB_2194 |
| Peptide Name | MBP-1 |
| PMID(s) | 1527010 |
| Plant Source (Scientific Name) | Zea mays |
| Plant Source (Common Name) | Maize |
| Plant Family | Poaceae |
| Peptide Family | Hairpin-like peptide |
| Peptide Function | Antimicrobial, Antibacterial, Antifungal |
| Peptide Function Description | Target site- Lipid Bilayer |
| Activity Against | Escherichia coli, Clavibacter michiganensis subsp. Nebraskensis, Fusarium graminearum(MIC: 60 µg/ml), Alternaria longipes(MIC: 30 µg/ml), Sclerotinia trifoliorum(MIC: 30 µg/ml), Fusarium moniliforme(MIC: >60 µg/ml), Aspergillus flavus |
| IC50 value | --NA-- |
| Sequence | RSGRGECRRQCLRRHEGQPWETQECMRRCRRRG |
| Sequence Length | 33 |
| Validation | Experimental evidence at protein level |
| Average Molecular Weight (Da) | 4130.7 |
| Monoisotopic Molecular Weight (Da) | 4127.99 |
| Isoelectric Point (pI) | 11.35 |
| Method / Extraction | --NA-- |
| External links (Uniprot, PDB and Source Information Database) |
|---|
| Uniprot | P28794, B6SLF6 |
| NCBI | 126793 |
| EMBL | --NA-- |
| Link to Source Databases | DBAASP_4350, PhytAMP_PHYT00258, EROP-Moscow_01390, CAMPSQ111, APD_00184 |
|---|
| Addtional Information | Synthesis Type: Ribosomal; Shows 100% Killing against Escherichia coli at 3 ¼g/ml; Shows 80% Killing against Clavibacter michiganensis subsp. Nebraskensis at 30 ¼g/ml; Not active at 30 ¼g/ml; low inhibition at 60 ¼g/ml- Aspergillus flavus ; The synthetic form showed the same activity as the native peptide. Updated 9/2015 |
