Detailed information



This page of PtRNAdb provides more detailed information about individual tRNA present in the database. Further, by clicking on the isoacceptor or isodecoder name, user can view the consensus based study results of all the tRNAs from the respective plant and isoacceptor/isodecoder.


PtRNAdb ID74798_PtRNAdb
Plant SourcePrunus persica     |     Phanerogamae -->Dicot
Genome levelNuclear
tRNA IDchr-G3.trna20
tRNA locuschr-G3 : 26806904 - 26806984 (+)
IsoacceptorLeu

[NOTE: User can view the results of the consensus based study of all the tRNAs of Leu isoacceptor in Prunus_persica plant by clicking on the isoacceptor]

IsodecoderAAG

[NOTE: User can view the results of the consensus based study of all the tRNAs of AAG isodecoder in Prunus_persica plant by clicking on the isodecoder]

tRNA Sequence
GTGGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCCACA
tRNA secondary structure
>>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<.
Upstream sequence (upto 100nt)
CTAATTGAAAATTTCCATTTTCACCTTAATTGATGCGCGATTCCATTCTGACCCAATAAGAACAGGATATTACGGAGAGGGTGTAACTCTGACGTCGCAA
Downstream sequence (upto 100nt)
CTCTGTTTTTCTCAATTTTAGTTTCTGATTGCTTCCATTTAACACAACCACTCTCCACGCTACCAAGCCAAACACAGCTTCTGTAGATCCAGTTATGTCC
Mature tRNA
GUGGAGAUGGCCGAGUUGGUCUAAGGCGCCAGAUUAAGGUUCUGGUCCGAAAGGGCGUGGGUUCAAAUCCCACUCUCCACA
HMM Score49.90
Secondary structure Score22.70