Detailed information



This page of PtRNAdb provides more detailed information about individual tRNA present in the database. Further, by clicking on the isoacceptor or isodecoder name, user can view the consensus based study results of all the tRNAs from the respective plant and isoacceptor/isodecoder.


PtRNAdb ID60648_PtRNAdb
Plant SourceMusa acuminata     |     Phanerogamae -->Monocot
Genome levelNuclear
tRNA IDchr-3.trna61
tRNA locuschr-3 : 8326297 - 8326226 (-)
IsoacceptorPro

[NOTE: User can view the results of the consensus based study of all the tRNAs of Pro isoacceptor in Musa_acuminata plant by clicking on the isoacceptor]

IsodecoderTGG

[NOTE: User can view the results of the consensus based study of all the tRNAs of TGG isodecoder in Musa_acuminata plant by clicking on the isodecoder]

tRNA Sequence
GGATGTTTAGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCTTGAGTTTGATTCTCGAAATGCCCT
tRNA secondary structure
>>.>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.<<.
Upstream sequence (upto 100nt)
TTACTGGATCCAAGAGTAAAAATAATGATCACACCAGATCCTCACTCAATTATGTCCCTTTTGGCTATTCACTTATATTAATTAAAGAAAATATCAAATA
Downstream sequence (upto 100nt)
TAGCTTTTTTTTTTTTTATTCAGATAGTTGAGACTTTATGTCTTTGTTGTCGTTATATACACCTAAGATCTTTTGGCATGCATGTTTTTGTCGATTTCAT
Mature tRNA
GGAUGUUUAGUCUAGUGGUAUGAUUCUCGCUUUGGGUGCGAGAGGUCUUGAGUUUGAUUCUCGAAAUGCCCU
HMM Score23.00
Secondary structure Score24.50