tRNA Gene List

This page shows the results for a single plant selected by the user in PtRNAdb browse module. Users can further filter the results by entering keywords in the search bar on the top right corner of the output table. For further information about each entry user can click on the PtRNAdb ID. To download the results click: Download

PtRNAdb ID	Plant Name	Clade	tRNA Name	tRNA Locus	tRNA Type	Anticodon	tRNA length	Infernal Score	Secondary structure score	HMM Score	Isotype Score
60342_PtRNAdb	Morella_rubra	Dicot	chr-2.trna1-Gln-TTG	chr-2 : 213430 - 213359 (-)	Gln	TTG	72	28.6	17.80	10.80	26.1
60343_PtRNAdb	Morella_rubra	Dicot	chr-5.trna1-Pro-TGG	chr-5 : 574637 - 574709 (+)	Pro	TGG	73	46.7	22.30	24.40	51.7
60344_PtRNAdb	Morella_rubra	Dicot	chr-6.trna1-Met-CAT	chr-6 : 124223 - 124308 (+)	Met	CAT	74	64.2	23.40	40.80	104.0
60345_PtRNAdb	Morella_rubra	Dicot	chr-6.trna2-Trp-CCA	chr-6 : 175452 - 175523 (+)	Trp	CCA	72	75.8	24.60	51.20	105.6
60346_PtRNAdb	Morella_rubra	Dicot	chr-6.trna3-Trp-CCA	chr-6 : 200079 - 200008 (-)	Trp	CCA	72	75.8	24.60	51.20	105.6
111448_PtRNAdb	Morella_rubra	Dicot	chl.trna10-Arg-ACG	chl : 112635 - 112708 (+)	Arg	ACG	74	57.7	16.40	41.30	n/a
111449_PtRNAdb	Morella_rubra	Dicot	chl.trna11-Leu-TAG	chl : 119349 - 119428 (+)	Leu	TAG	80	63.2	35.20	28.00	n/a
111450_PtRNAdb	Morella_rubra	Dicot	chl.trna12-Asn-GTT	chl : 134995 - 135066 (+)	Asn	GTT	72	68.2	23.50	44.70	n/a
111451_PtRNAdb	Morella_rubra	Dicot	chl.trna13-Leu-CAA	chl : 149776 - 149856 (+)	Leu	CAA	81	62.3	27.90	34.40	n/a
111452_PtRNAdb	Morella_rubra	Dicot	chl.trna14-Met-CAT	chl : 157465 - 157538 (+)	Met	CAT	74	70.4	26.80	43.60	n/a
111453_PtRNAdb	Morella_rubra	Dicot	chl.trna15-Val-GAC	chl : 143573 - 143502 (-)	Val	GAC	72	58.9	30.30	28.60	n/a
111454_PtRNAdb	Morella_rubra	Dicot	chl.trna16-Ile-GAT	chl : 141490 - 141403 (-)	Ile	GAT	72	16.4	16.40	0.00	n/a
111455_PtRNAdb	Morella_rubra	Dicot	chl.trna17-Arg-ACG	chl : 135724 - 135651 (-)	Arg	ACG	74	57.7	16.40	41.30	n/a
111456_PtRNAdb	Morella_rubra	Dicot	chl.trna18-Asn-GTT	chl : 113364 - 113293 (-)	Asn	GTT	72	68.2	23.50	44.70	n/a
111457_PtRNAdb	Morella_rubra	Dicot	chl.trna19-Leu-CAA	chl : 98583 - 98503 (-)	Leu	CAA	81	62.3	27.90	34.40	n/a
111458_PtRNAdb	Morella_rubra	Dicot	chl.trna1-Arg-TCT	chl : 11273 - 11344 (+)	Arg	TCT	72	66.5	28.50	38.00	n/a
111459_PtRNAdb	Morella_rubra	Dicot	chl.trna20-Met-CAT	chl : 90894 - 90821 (-)	Met	CAT	74	70.4	26.80	43.60	n/a
111460_PtRNAdb	Morella_rubra	Dicot	chl.trna21-Pro-TGG	chl : 70800 - 70727 (-)	Pro	TGG	74	65.6	24.70	40.90	n/a
111461_PtRNAdb	Morella_rubra	Dicot	chl.trna22-Trp-CCA	chl : 70610 - 70537 (-)	Trp	CCA	74	68.7	25.80	42.90	n/a
111462_PtRNAdb	Morella_rubra	Dicot	chl.trna23-Thr-TGT	chl : 50376 - 50304 (-)	Thr	TGT	73	70.9	22.70	48.20	n/a
111463_PtRNAdb	Morella_rubra	Dicot	chl.trna24-Met-CAT	chl : 40215 - 40142 (-)	Met	CAT	74	68.4	28.40	40.00	n/a
111464_PtRNAdb	Morella_rubra	Dicot	chl.trna25-Ser-TGA	chl : 38656 - 38564 (-)	Ser	TGA	93	70.8	21.50	49.30	n/a
111465_PtRNAdb	Morella_rubra	Dicot	chl.trna26-Glu-TTC	chl : 33515 - 33443 (-)	Glu	TTC	73	53.6	22.30	31.30	n/a
111466_PtRNAdb	Morella_rubra	Dicot	chl.trna27-Tyr-GTA	chl : 33383 - 33300 (-)	Tyr	GTA	84	62.3	21.70	40.60	n/a
111467_PtRNAdb	Morella_rubra	Dicot	chl.trna28-Asp-GTC	chl : 32824 - 32751 (-)	Asp	GTC	74	67.0	17.50	49.50	n/a
111468_PtRNAdb	Morella_rubra	Dicot	chl.trna29-Ser-GCT	chl : 9335 - 9248 (-)	Ser	GCT	88	66.5	15.10	51.40	n/a
111469_PtRNAdb	Morella_rubra	Dicot	chl.trna2-Cys-GCA	chl : 29914 - 29984 (+)	Cys	GCA	71	67.4	29.20	38.20	n/a
111470_PtRNAdb	Morella_rubra	Dicot	chl.trna30-Gln-TTG	chl : 8019 - 7948 (-)	Gln	TTG	72	56.7	16.20	40.50	n/a
111471_PtRNAdb	Morella_rubra	Dicot	chl.trna31-His-GTG	chl : 104 - 31 (-)	His	GTG	74	63.7	17.30	46.40	n/a
111472_PtRNAdb	Morella_rubra	Dicot	chl.trna3-Thr-GGT	chl : 34305 - 34376 (+)	Thr	GGT	72	66.7	26.80	39.90	n/a
111473_PtRNAdb	Morella_rubra	Dicot	chl.trna4-Gly-GCC	chl : 39895 - 39965 (+)	Gly	GCC	71	68.1	24.10	44.00	n/a
111474_PtRNAdb	Morella_rubra	Dicot	chl.trna5-Ser-GGA	chl : 48957 - 49043 (+)	Ser	GGA	87	73.6	26.60	47.00	n/a
111475_PtRNAdb	Morella_rubra	Dicot	chl.trna6-Phe-GAA	chl : 52237 - 52309 (+)	Phe	GAA	73	67.1	22.60	44.50	n/a
111476_PtRNAdb	Morella_rubra	Dicot	chl.trna7-Met-CAT	chl : 56257 - 56329 (+)	Met	CAT	73	59.5	23.80	35.70	n/a
111477_PtRNAdb	Morella_rubra	Dicot	chl.trna8-Val-GAC	chl : 104786 - 104857 (+)	Val	GAC	72	58.9	30.30	28.60	n/a
111478_PtRNAdb	Morella_rubra	Dicot	chl.trna9-Ile-GAT	chl : 106869 - 106956 (+)	Ile	GAT	72	16.4	16.40	0.00	n/a