<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP34035

Description Uncharacterized protein
SequenceMFIIGNAVELIIFISALTKDEIRIVQASLLGSILANLLLILGMSMLLGGLRFREQVYNSTVTQMSACLLSLSVISLVLPTAFHASFQDNDLADRQSLKISRGTSIVLLLVYVIYLMFQLKSHAYMYESTPQHIIDAELAPGPAAGLLDSSSSDDSSSSSSDSSDSDSSHGTMRKKMKKVLRNRRHRRSSTASVDTADTKGTRSASFTTTNTTPQDEVSEATASRHRFPRFPSYEGSESAIEEEDEEEAKRSRRRRRYRRHRHRKSKKQARDAKKAAGVTEAQNELPENAPQNNSECEPRRVDFAVQDDLEAGPSNTGKRPFPLRGLSVKNIPPVFTEKSTVASTPVPHVRYGIRRTNSLPDRLQFRAPGAMLPSSVPPILTAPGAHMIAKEQENEEDHLTQSGAIILLLVSTALVAVCAEFLVDSIKEVVETSGVNEVGIGLIILPIVGNAAEHVTAIKVAYKNHMDLAIGVAVGSSIQIALLLTPVMVILGWIIDKDMSLYFTLFETVCLFVSAFIVNFLVLDGRSNYLEGALLCAVYIIIAVVAFFYPNE
Length552
PositionKinase
OrganismFusarium oxysporum f. sp. raphani 54005
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Nectriaceae> Fusarium> Fusarium oxysporum species complex.
Aromaticity0.06
Grand average of hydropathy-0.019
Instability index56.67
Isoelectric point6.69
Molecular weight60537.66
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
GO - Biological Process
transmembrane transport	GO:0055085	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP34035
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.42|      20|      37|      65|      84|       1
---------------------------------------------------------------------------
   65-   84 (33.59/21.93)	SACLLSLSVISLVLPTAFHA
  104-  123 (33.82/22.12)	SIVLLLVYVIYLMFQLKSHA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.75|      25|      27|     205|     230|       2
---------------------------------------------------------------------------
  205-  230 (39.45/31.43)	SFTTTNTTPQDE.VSEATASRHRfPRF
  232-  257 (37.30/24.04)	SYEGSESAIEEEdEEEAKRSRRR.RRY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     108.61|      34|      35|     380|     413|       3
---------------------------------------------------------------------------
  361-  390 (35.21/18.89)	......DRLqfRAPGA..MLPSSVPPILTAPGAHMIAK
  391-  424 (53.02/31.69)	EQENEEDHL..TQSGA..IILLLVSTALVAVCAEFLVD
  427-  451 (20.38/ 8.24)	KEVVETSGV..NEVGIglIILPIVGNA...........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.36|      19|      27|     314|     332|       6
---------------------------------------------------------------------------
  314-  332 (34.88/25.04)	SNTGKRPFP.LR.GLSVKN.IP
  339-  360 (20.48/11.57)	STVASTPVPhVRyGIRRTNsLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.29|      20|      75|     181|     204|       8
---------------------------------------------------------------------------
  181-  200 (34.47/27.71)	RNRRHRRSSTASVDTADTKG
  258-  277 (32.82/15.97)	RRHRHRKSKKQARDAKKAAG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP34035 with Med13 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AGLLDSSSSDDSSSSSSDSSDSDSSHGTMRKKMKKVLRNRRHRRSSTASVDTADTKGTRSASFTTTNTTPQDEVSEATASRHRFPRFPSYEGSESAIEEEDEEEAKRSRRRRRYRRHRHRKSKKQARDAKKAAGVTEAQNELPENAPQNNSECEPRRVDFAVQDDLEAGPSNTGKRPFPLRGLSVK
144
329










Molecular Recognition Features






MoRF SequenceStartStop




1) RRHRHRKSKKQARDAKKA
258
275