<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33945
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MNHLNLMDQDPPDDFASDSFFDQNSLQQQIQQIDAGADLSDADINGTVPSVAIPPNPAVVEQLARKWYSGCLERIAWSRHGHLAGISEDGSTVYLECLRYDHGSKSWGLHERHSLTTVFEEAISLAWSATGGELAVVDIKGRVWIYHVALTAINRLNLARQGAIDEGDDYSQPIGLTWLNQDRQERPRNVVTHASKGETRWEHANSRAKPLGTYWPRAALIVHRNGLTTLCFQRRDGQYLRIIKQLTPQDGVLYTHASFAPTIDGKMLIAIHSYQKVISAVLLAIDWTEVNQGLEGLPVLTIDPVSSKVSSYPSGSAAVPDTFDPESWLLSHLTMVQTSDVEKAVQTPPTILAVLTGVNRTASIPDAGFLVSSLIKRWTVKSVETKLHPLFDALPSTGSAAAAPKPLYVLQEQPDKEEQVIITVHHIDGVQTLAITTQENRTDFLSLEDLTPMSYAASAQETSCMAQSGFTFPYTQTILDPSFSPGACVRADLTANGKTQLAVMEHHLEQHQIQQPLDPHVDAAIAALNLTFARACWSNATIDDILMCASRTIPPALIPTVISSVYRTLFRDGEFVHEKTPGSELERMFHKQVMAKVFSYHASLASTCSQLVSVASTDGRTGGWTLSAQWAWIVNNVRQTTTLLFMNLRDIQNVTIVVGQDFTDMLCANLRWGLSLIRFIFNAILEVGDRESNPDMFDGKDRGRLGDTHGDGSQGLVALLLNCHASRIFLIAFVRAVRTYAKITEPKSQHQLQVLQCIQQQTNGKGLSFGAIEALLEYRWSAAGDVEGNIAATAVRQLDMMATGIVHEAYQPTIKTLLSKLVNSPSGLRAKMLVDRLKLFVDHVDLEYIFLNPGILGHRRGGRSTEIIYDVLRKRPITKGTAEPHGAGQPMVRKCIRCGSFSEDVVVPPKEWPRQIALSLARCVCDGNWVLEPWEKVHK |
Length | 939 |
Position | Tail |
Organism | Cladophialophora yegresii CBS 114405 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Chaetothyriomycetidae> Chaetothyriales> Herpotrichiellaceae>
Cladophialophora.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.135 |
Instability index | 35.86 |
Isoelectric point | 6.08 |
Molecular weight | 103772.96 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP33945
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 150.67| 56| 562| 261| 320| 1
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261- 319 (83.92/64.40) PTIDgkMLIAIHSYQKVIsAVLLAIDWTEV..NQGLEGLPVL...TIDPVSSKV....SSYPS.GSAAV
337- 402 (66.75/38.06) QTSD..VEKAVQTPPTIL.AVLTGVNRTASipDAGFLVSSLIkrwTVKSVETKLhplfDALPStGSAAA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 78.61| 23| 695| 23| 45| 2
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23- 45 (40.24/25.91) QNSLQ..QQIQQIDAGADLSDADIN
749- 773 (38.37/24.38) QHQLQvlQCIQQQTNGKGLSFGAIE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 305.44| 96| 469| 63| 161| 4
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63- 161 (160.29/109.11) LARK.WYSGCLERIAW..SRHGHLAGISEDGSTVYLECLR...YDH....GSKSWGLHERHSLTTVFEEAISLAwSATGGELAVVDIKGRV..WIYHVALTAInrLNLARQ
532- 639 (145.15/88.11) FARAcWSNATIDDILMcaSRTIPPALIPTVISSVYRTLFRdgeFVHektpGSELERMFHKQVMAKVFSYHASLA.STCSQLVSVASTDGRTggWTLSAQWAWI..VNNVRQ
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