<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33934

Description Uncharacterized protein
SequenceMEEREWSEYERRVVETVKWCEDRNESPLVWAMEVGKLADRVPSPALGQVLVSHLCFLNNRPSLWKFLEQSLSSGLLSPFHVLSLLSARIIPHRRSQPEAYNLYLELLSRYGLSFDPLPPHASKEKIIKSVDLSLRLSQTYDVPTLELGHAYVLFFFSVVIGLIDSILDDWGLQKSSLDVSSLAFVSTDCDDMDIDPRESHNMGRKEYRGEMGSKNTLKALDVLGKLLESRKAVLLLRLVHFNMPEKFNGLLRRLELLKAHRLASSDLKPAMQLLEIFSANILRVVGCELHLDKRQIIGMLVANGSCKPVSLSNYESGRSSCWVALDVYMENTIDGKQLPIKSAIDVLADVTVTLQILNQATWQETFLALWFSALRLVQRERDPLEGPVPHLEARLCVLLSIVPLAISKVLEDETQLYPSSHPSTIVSGYETDHGHGMSGKTRVPRKHGLISSLHVLGQFPALLCPPPSVVGAANVAVTKAARFVHNSRNEKDRVDYGSNGQGFINSGGNMRHLIVEACIARNFIDTSAYFWPGYVPASAISPSEASPVQESPWSKFIEGAPLSGNLISSLVSTPASSLAEIEKLYHIALHGSEEEKSAAAKILCGASLRSGWNTQEHVVRVLVKLLSPPVPPNYNGERSHLVDYMPMLSGILYGASSVDTVHIFSLHGVVPEVAASLMPLCEVFGSLEPTTLSAKSSKGDDPSIYMVFSLAFLFLLRLWKFYRPPLENCITEHTRAVGGELSLEYLLLLHNSRTAFFQYETDSNPGRIENASDNGIYVHSFPKLQTWYWQNKSCVASTLSGLSSESPVHQVANKILNMIYLKITKTGSALGNSSISSSNGSFTSSGEDSFQRPMHLPAWEVLEAIPFVLEAILTACAHGRLSSRDLTTGLRDLVEFLPASLAAIISYFSAEITRGIWKSVPMNGNDWPSPAPMLPSVQSEIKEILAAVGVSIPSYFSEASQITLPLPMAALVSLTITFKLDKSLDYIHAVAGPALESCASSCPLPGMPIVGSLWAQKVRRWHDFIVVSCSRSVFRHNKESVAQLLRSCFTTYLGSLHVLTPSLSNESGVNGLLGSTISDRSVRRFLAPGFLYLRSWQSMQNVLYINVVIVELVAEYARTSALRWATAESPRLKSSQASLCLATARAREVATLGASLLCVAGGFRMVQELYMETIPTWLLSRKDMKQGEVSAVSRVVEGYAMAYLFLLSGSLLWSVHGKLPKWVLTKRVRIVGVHMDFLAGVLEGKIALACHPATWKAYVSCLVGLMVNFAPAWIQELKLKTLRTLASGLRGWHECELALALLERGGVAAIGSAAELLNVIC
Length1321
PositionTail
OrganismMorus notabilis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus.
Aromaticity0.08
Grand average of hydropathy0.109
Instability index47.96
Isoelectric point7.22
Molecular weight145434.35
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33934
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.69|      21|      31|      24|      44|       1
---------------------------------------------------------------------------
   24-   44 (37.62/21.02)	NESPLVWAMEVGKLADRVPSP
   58-   78 (37.07/20.61)	NNRPSLWKFLEQSLSSGLLSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.73|      10|      31|     708|     717|       2
---------------------------------------------------------------------------
  708-  717 (17.56/ 9.46)	FSLAFLFLLR
  741-  750 (17.17/ 9.08)	LSLEYLLLLH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.57|      14|      31|     860|     873|       3
---------------------------------------------------------------------------
  860-  873 (22.20/12.44)	EVLEAIPFVLEAIL
  892-  905 (22.37/12.59)	DLVEFLPASLAAII
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     304.79|      97|     264|     486|     590|       5
---------------------------------------------------------------------------
  486-  590 (152.42/111.33)	NSRNEKDRVDYGSNgQGFINSGGNmrhlivEACIARNFIDTSAYFWPG.YVPASAISP.SEASPVQESPwSKFIEGAPL....SGNLI..SSLVSTPASSLAEIEKLYHIALH
  751-  855 (152.37/90.34)	NSRTAFFQYETDSN.PGRIENASD......NGIYVHSFPKLQTWYWQNkSCVASTLSGlSSESPVHQVA.NKILNMIYLkitkTGSALgnSSISSSNGSFTSSGEDSFQRPMH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     118.49|      26|     371|     304|     329|       6
---------------------------------------------------------------------------
  304-  329 (51.26/29.01)	GSCKPVSLSNYESGRSSCWVALDVYM
  629-  645 (28.65/13.02)	....PVP.PNYNGERS....HLVDYM
  685-  706 (38.58/20.04)	GSLEPTTLS....AKSSKGDDPSIYM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     102.95|      31|      32|     911|     941|      11
---------------------------------------------------------------------------
  911-  941 (58.83/32.97)	EITRGIWKSVP...MNGNDWPSPAPMLPSVQSEI
  943-  976 (44.12/22.89)	EILAAVGVSIPsyfSEASQITLPLPMAALVSLTI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.57|      20|     162|    1002|    1021|      12
---------------------------------------------------------------------------
 1002- 1021 (40.04/28.33)	CPLPGMPIVGSLWAQKVRRW
 1158- 1177 (38.53/26.94)	CVAGGFRMVQELYMETIPTW
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33934 with Med33 domain of Kingdom Viridiplantae
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