<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33928

Description Uncharacterized protein
SequenceMQGGLRQISWFQFLPHESDWNSLPDKSGVKGEHKDAATMLVLSSHLQLQKEGFLSTCTNSFVGPWDPSQGLHNPDEKIKLWIFLPGQHSSVVESAQAAVSRLRGTTSSLSFYDFYLDTIFMLCIENVLICFEEVVKFGLWLAPGDSEEVAAALSQALRNCIERALHGLSYVRFGDVFSKFRPSSQSEEIFRRGQPTVEFIFAATEEGIYVHAIISSKHIRALSSADLERVSKQSSNFTSYRLPVIVSPHGIRGRLTGSCSNDLVKQLYFSSSKLRASNGFIGLANHVSQGSGCQLGGQNCYVEVTLGCHRSGDDGRLHSISKSNRNVPKHHVAESTALERADQKGTLDNKAVYEKTFLYPPEAVLVPVLQATFPRSSLKRYLMVNFLPTIAVFIKMMIEPSQMGCG
Length406
PositionKinase
OrganismMorus notabilis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus.
Aromaticity0.09
Grand average of hydropathy-0.140
Instability index52.32
Isoelectric point8.04
Molecular weight44986.75
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33928
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     116.70|      37|      56|      77|     114|       1
---------------------------------------------------------------------------
   77-  114 (58.62/44.29)	KIKLWiFLPGQHSSVVESAQAAVSR.LRGTTSSLSFYDF
  136-  173 (58.08/39.08)	KFGLW.LAPGDSEEVAAALSQALRNcIERALHGLSYVRF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.94|      29|      30|     213|     242|       2
---------------------------------------------------------------------------
  213-  242 (43.45/32.98)	IISSKHIRA.LSSADLERVSKQsSNFTSYRL
  245-  274 (46.49/30.56)	IVSPHGIRGrLTGSCSNDLVKQ.LYFSSSKL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33928 with Med13 domain of Kingdom Viridiplantae
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