Description | Transcription elongation regulator 1 |
Sequence | MTTPAPNVGSTSSWGPPAAFTMPPGTPGAPGTPGPPGILQSTHISSNITVGPVAVDTSLTVQRPIMPSPMGAMASNSAVQQQIGVPYQSLPSMAAPPQGPWLQPSPQMGGVPRLPNLLYHAAFPGPFPSMARGIPPSVPGPDSQPPGIAPVGNTRLTPTPFAASVQPVVAGSSGTRMELHTSDEQTHVRDVRSQVSADVNEQSDAWTAHKTEAGVVYYYNTLTGESTYDKPPGFKGEPEKVSVQPVPVSMVNLPGTDWVLVSTSDGKKYYYNNKTKVSSWQIPNEVTELRKKQESDIPKENSTSVPNNNVLAEKGSTPINLNAPAINTGGRDAMALRSTSAQGSSSALDLIKKKLQEFGTPVTSSSGQVQPGIAASESNGSRAVEPTAKGQQSESSKDKPKDANGDRNMTDSSSDSEDADSGPTKEECIIQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSYSLRRSLFEHYVKTRVEEERKEKRAALKAAIEGFKKLLDEASEDIDHKTYYQTFRKKWGDDPRFLALDRKDREHLLNERVLPLKRATEEKAQAIRAAAASNFKSMLREKGDVTVNSRWSRVKESLRDDPRYKSVKHEDREVLFNEYLSDLRAAEEEVEREAKAKRDEQDKLKERERELRKRKEREEQEMERVRIKVRRKEAVVSFQALLVETIKDPQASWTESKSKLEKDPQGRASNPDLDSSEMEKLFREHIKTLQERCAREYKALLAELLTADAAERETDDGKTVLNSWSTAKRLLKPDPRYNKMPRKDRETLWRRYAEDMLRKQQKSEPNSKEDKKIDPRNRTSVDSGRLPSGLRGTHERR |
Length | 829 |
Position | Unknown |
Organism | Morus notabilis |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.886 |
Instability index | 51.77 |
Isoelectric point | 9.11 |
Molecular weight | 92370.68 |
Publications |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP33926 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 436.47| 106| 109| 6| 111| 1 --------------------------------------------------------------------------- 6- 98 (158.95/80.62) ................PNVG.......STSSW.GP.P.........A.AFTMPP......GTPGAP.............GTPG..PPGI..LQST......HISSNITVGPVAVDTSLTVQRPIMPSPMGAMASNSAVQQQIGV.PYQSLP.SMAAPPQ 99- 202 (134.82/67.25) GPWLQPSPQMGGVprlPNLL.......YHAAFpGPfP.........SmARGIPP......SVPG.P.............DSQ...PPGIapVGNT......RL....TPTPFA..AS..VQ.PVVAGSSGTRMELHTSDEQTHVrDVRSQV.SADVNEQ 204- 323 (109.43/53.19) DAWTAHKTEAGVV........................yyyntltgeS.TYDKPP......GFKGEPekvsvqpvpvsmvNLPG..TDWV..LVSTsdgkkyYYNNKTKVSSWQIPNEVTELRKKQESDIPKENSTSVPNNNVLA.EKGSTPiNLNA... 324- 388 (33.26/10.99) .....PAINTGG........rdamalrSTSAQ.GS.S.........S.ALDLIKkklqefGTP.VT.............SSSGqvQPGI..AASE......SNGSR.AVEPTA.............................................. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 425.08| 64| 66| 480| 543| 2 --------------------------------------------------------------------------- 429- 479 (53.01/24.16) .........................IIQFKEMLKE..RGVAP.FS...KWEKELPKIVFDPRFKAipsysLRRSLFEHYVKT 480- 543 (105.06/54.56) RV...EEERKE.KRAAL....KAA.IEGFKKLLDEASEDIDH.KT...YYQTFRKKWGDDPRFLA.....LDRKDREHLLNE 544- 610 (83.18/41.78) RVlplKRATEE.KAQAI....RAAaASNFKSMLRE.KGDVTV.NS...RWSRVKESLRDDPRYKS.....VKHEDREVLFNE 616- 645 (42.36/17.93) RA...AEEEVE.REA......KA......KR..DEQD..................K......L..........KERERELRK 646- 716 (74.84/36.91) RK...EREEQEmERVRIkvrrKEA.VVSFQALLVETIK..DP.QA...SWTESKSKLEKDPQGRA.snpdLDSSEMEKLFRE 721- 780 (66.63/32.11) LQ...ERCARE.YKALL....AEL.LTA.....DAAERETDDgKTvlnSWSTAKRLLKPDPRYNK.....MPRKDRETL... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 31.44| 10| 14| 394| 404| 3 --------------------------------------------------------------------------- 394- 404 (13.87/ 8.86) ESSKDkPKDAN 411- 420 (17.58/ 7.11) DSSSD.SEDAD --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) LIKKKL 2) LWRRYAEDMLRKQ | 350 780 | 355 792 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab