<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33925

Description U-box domain-containing protein 35
SequenceMWLPKNQLEKKGGNGLVAVAIDRDKNSQNALIWAIDNLLQRGRTVILIHVEIKHVSHSSASNVCNYNAREESLVLCKEPDAQTKKLLLPFRCFCTRKDIQCKDIMLEDIDVAKALTEYVSQAAIENLVLGASARNGFLRFKVTDIPSSVTKGAPDFCNVYVISKGKVQSQRSALRPAPANSPLRFEFEKTSSLNSEPLEPNVSPLPTASMKGFEKPPEPLRKSHDDIDSIRSPFTRIGLKGRSHGELPMPDSDISFISSGRPSVDHVYQSFNDNLDSGRTTPRVSNGTDVDLNGSFESMQFGWRSVDNYSLSEFSSFSQDSDNLSCSSQAIDDVEAEMRRLKLELKQTMEMYSTACKEALAANKKAVELQRWKKEEERRLEEARLSEEAAIMLVEKERAKSKVAIEAAEAAKRIADLEVQKRISAEKKALKEAEERRKAFDALAKTDIRYRKYSIDEIEAATGSFQESRKIGEGGYGPVYKGYLDHTPVAIKVLRPDAAQGRSQFQQEVEILSCMRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLFRQGNTRPLSWQLRFRIAAEIGTGLLFLHQSKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPSSIADNATQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITARSAMGLTHHVERALEKGTLAQMLDPGVPDWPIEEALDFAKLALKCAELRRKDRPDLDTVILPELNTLRAFAEDNMQLMFLDGDGSPMSNYSQVSLQLKIEKEYATDNKVAEDISASRFTSLETDVEEQPRSLKSKKH
Length801
PositionTail
OrganismMorus notabilis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus.
Aromaticity0.07
Grand average of hydropathy-0.437
Instability index46.87
Isoelectric point6.22
Molecular weight89725.13
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33925
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     104.30|      23|      24|     394|     416|       1
---------------------------------------------------------------------------
  369-  390 (24.12/14.29)	LQRWKKEEERRLEEARLSEEAA.
  394-  416 (30.44/20.07)	VEKERAKSKVAIEAAEAAKRIAD
  419-  441 (32.02/21.52)	VQKRISAEKKALKEAEERRKAFD
  444-  461 (17.71/ 8.41)	AKTDIRYRKYSIDEIEAA.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.82|      19|      24|     257|     278|       2
---------------------------------------------------------------------------
  257-  278 (21.22/25.61)	ISSGrPSVDhVYQSFnDNLDSG
  284-  302 (34.61/20.79)	VSNG.TDVD.LNGSF.ESMQFG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     107.88|      24|      26|     203|     227|       3
---------------------------------------------------------------------------
  176-  198 (31.16/15.59)	.PAPANSPLRFEFEKTSSLNS.EPL
  203-  227 (37.95/25.65)	SPLPTASMKGFEKPPEPLRKShDDI
  232-  254 (38.77/21.19)	SPFTRIGLKGRSHGELPMPDS..DI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33925 with Med32 domain of Kingdom Viridiplantae
Unable to open file!