<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33924

Description U-box domain-containing protein 35
SequenceMARGGGGGGGEKKEEVVVVAIDKDKSSQYALKWTVDHLITRGQTVVLLHIKNRASSVPNPFGNFVSVNEVSEDVARTYKQQLENQAKDLFLPFRCFCTRKDIKCDEVILEDLDISKAIINYVSANSIETLVLGAASRNSLVKRFKTTDVPSSVSRGAPEFCTVYVIAKGKISSVRSASSPAPTRSNSSRYNSHSSHPPRDQRQLNHTPHQQHDEMDFRSPFARGKGLTNKSYELSPETDISYVSHGRPSLYDSIDFQGMSPSFSTSSDFDAPRSSFTSSSPFSGNKSIDITSSHYDFTDYSNDSTNSSSSQNNVDDVDAEMKRLRLELKQTMDMYSSACKEALTAKKTAIELHRWKLEEEQRLEEAQLAEEAALALAEKEKAKCKVAIEAAEAAQRIAELEAQKRVQAEMKAQKEAEERKKALGSLSHEIRYRKYTIEEIEMATEDFSESRKIGEGGYGPVYRCELGHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEFGCLVYEYMAHGSLEDRLFRRGNTPVLPWQLRFRISAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADAVTQYRMTATAGTFCYIDPEYQQTGMLGIKSDIYSLGVLLLQLITAKPPMGLTHHMERAIDKGGFTEMLDPAVTDWPLEETFKFTKLALQCAEMRRKDRPDLGKVVLPELNRLREIADSNDYNNMPLSLVSRSSSKGASASSSSSQDVLSDVQLRQSGYESTSSSSEKA
Length769
PositionTail
OrganismMorus notabilis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus.
Aromaticity0.07
Grand average of hydropathy-0.493
Instability index53.03
Isoelectric point6.36
Molecular weight85538.49
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33924
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.27|      20|      23|     371|     392|       1
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  373-  392 (33.01/24.76)	ALALAEKE.....KAKCKVAIEAAE
  394-  418 (25.26/10.98)	AQRIAELEaqkrvQAEMKAQKEAEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     102.23|      22|      23|     249|     270|       2
---------------------------------------------------------------------------
  210-  239 (26.18/10.18)	QQHDEMDFR..SPfargkgltnkSYELSPETD
  249-  270 (40.20/18.76)	SLYDSIDFQGMSP..........SFSTSSDFD
  275-  296 (35.84/16.09)	SFTSSSPFSGNKS..........IDITSSHYD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     371.98|     120|     596|      25|     153|       3
---------------------------------------------------------------------------
   25-  153 (184.10/167.58)	KSSQYALKWTVDHLITRGQTVVLLHIKNRASSvPNPFGNFVSVNEVSEDVARTYK.QQLENQAKDLflpfrcfcTRKD.IKCDEVILEDLDISKAIINYVSANSIE.TLVLGAASRNSLVKRFKTTDVPSSV
  630-  752 (187.88/144.15)	KSDIYSLGVLLLQLITAKPPMGLTHHMERAID.KGGFTEMLDPAVTDWPLEETFKfTKLALQCAEM........RRKDrPDLGKVVLPELNRLREIADSNDYNNMPlSLVSRSSSKGASASSSSSQDVLSDV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.56|      14|      30|     320|     333|       4
---------------------------------------------------------------------------
  320-  333 (23.66/17.50)	EMKRLRLELKQTMD
  351-  364 (24.90/18.81)	ELHRWKLEEEQRLE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33924 with Med32 domain of Kingdom Viridiplantae
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