<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33918

Description Luminal-binding protein 5
SequenceMAGSWRARGSLIVLAIVTFGCLFAISIAKEEAAKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFDDKEVQKDIKLFPFKIVNKDGKPYIQVNIKDGETKVFSPEEISAMVLTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKYGKDISKDNRSLGKLRREAERAKRALSSQHQIRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLDKSQIQEIVLVGGSTRIPKVQQLLKEYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRMLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKSQINDKDKLADKLESDEKEKIETAVKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGAPGGGDESADDDDSHDEL
Length667
PositionUnknown
OrganismMorus notabilis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus.
Aromaticity0.06
Grand average of hydropathy-0.431
Instability index29.65
Isoelectric point5.04
Molecular weight73496.39
Publications









Function






Annotated function


GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33918
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     246.69|      69|     104|     343|     419|       1
---------------------------------------------------------------------------
  343-  412 (108.08/77.04)	RKTMGPVKKAMEDAGLDKSQIQ.EIVLVGGSTRIPK..VQQLLKEY.FDGKEPNKGVNPDEAVAYGAAVQGsIL
  448-  518 (100.35/54.51)	RNTVIPTKKSQVFTTYQDQQTTvSIQVFEGERSLTK..DCRMLGKFdLTGIPPAPRGTPQIEVTFEVDANG.IL
  520-  564 (38.26/15.87)	......VK..AEDKGTGKS..E.KITITNDKGRLSQeeIERMVREA.EEFAEEDKKV.................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.35|      25|      26|     575|     600|       2
---------------------------------------------------------------------------
  575-  600 (37.92/24.67)	ETYVYNMKSQINDkDKLADKLESDEK
  604-  628 (42.43/23.63)	ETAVKEALEWLDD.NQSAEKEDYDEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.32|      17|      21|      67|      84|       3
---------------------------------------------------------------------------
   67-   84 (27.98/26.11)	NR..ITPSWVAFtDSERLIG
   89-  107 (26.34/18.51)	NQaaVNPERTIF.DVKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.71|      17|      17|     184|     200|       4
---------------------------------------------------------------------------
  173-  191 (23.65/15.45)	KDAvvTVPAYFNDAQRQAT
  192-  208 (28.06/19.75)	KDA..GIIAGLNVARIINE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.30|      11|      26|     232|     242|       5
---------------------------------------------------------------------------
  232-  242 (20.46/11.64)	LGGGTFDVSIL
  260-  270 (21.85/12.92)	LGGEDFDQRIM
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33918 with Med37 domain of Kingdom Viridiplantae
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