<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33917

Description Heat shock cognate 70 kDa protein
SequenceMAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQNDMKLWPFKVIAGPGDKPMIVVNHKGEEKQFAAEEISSMVLIKMKEIAEAYLGIAIKNAVVTVPAYFNDSQRQATKDAGVIASLNVMRIINEPTAAAIAYGLDKKASSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDINGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDAVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQISVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIENMVQEAERYKAEDEEHKKKAEAKNALENYAYNMRNTIKDEKIASKVPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEDICSPIIAKMYQGGAAGGDAGGAMDEDGDPSPGGGSGAGPKIEEVD
Length652
PositionUnknown
OrganismMorus notabilis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus.
Aromaticity0.06
Grand average of hydropathy-0.430
Instability index35.43
Isoelectric point5.10
Molecular weight71197.70
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33917
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     180.90|      60|      74|     402|     466|       1
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  402-  466 (91.21/64.75)	VTPLSLGLE.TAGGVMTVLIPRNTTipTKKEQVFSTysdNQPGVLIQ......VYEGERTRTKDNNLLGKFE
  477-  543 (89.70/50.74)	VPQISVCFDiDANGILNVSAEDKTT..GQKNKITIT...NDKGRLSKeeienmVQEAERYKAEDEEHKKKAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.50|      18|      41|     337|     356|       3
---------------------------------------------------------------------------
  337-  356 (26.17/21.99)	VHDAVLVGGSTRipKVQQLL
  381-  398 (30.33/17.99)	VQAAILSGEGNE..KVQDLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.27|      18|      21|      38|      55|       4
---------------------------------------------------------------------------
   16-   33 (19.08/10.01)	....TTYSCVGVWQHDRveIIA
   38-   55 (32.67/21.99)	NR..TTPSYVAFTDTER..LIG
   60-   78 (24.52/14.81)	NQvaMNPTNTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.85|      24|      41|     546|     570|       6
---------------------------------------------------------------------------
  546-  570 (35.77/30.33)	NALENyAYNMRNTIKD.EKIASKVPA
  590-  614 (37.07/25.29)	NQLAE.ADEFEDKMKElEDICSPIIA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33917 with Med37 domain of Kingdom Viridiplantae
Unable to open file!