<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33911

Description Uncharacterized protein
SequenceMAVCVERSVWDSVLELTKVAQQKGSDPLVWAIQLSSNLNSMGVSLPSVEVANALVSYICWENNVPIVWKFLEKALVFKIVPPLLVLALLSSRVTKSIDGVLHLSNIFGLPASEPGVFVVEFIFSMAWQLLDASLDDEGLLNLTLEQNSKWVTKPQDVEIDGHGGYGEKWSEHNELLKNANTVMAIEIIGEMLQNIVTSRILFLARRHMQTHWTSFIGRLQLLAASSSSLRNSKTLSPESLLQLTSDTRIVLSRECKTSSLQKFHAVMAFGSLASSAGLCHGASRSALWLPLDLVLEDAMDGYQVEATSAIERISGLIKTLQAINGTTWHDTFLGLWIAALRLIQRERDPMEGPVPHLDTRLCMLLCITTLVVADLIEEESALLNETECGSTNHWKEKEVPGKRRNDLVSSLQMLGDYRGLLEPPQSVVSVANQAAAKAMLFISGIGVGNAYFECLSVEDMPINCSGNMRHLIVEACIARNLLDTSAYFWPGYVNGRISQIPQGVPAQFPGWSSFLNGAALAPLMISALASSPASSLAELEKVFEIAIKGSDDERISAATILCGASLIQGWNIQEHTAHFIIRLLSPPVPADCSGADSHLIGYAPMLNVLIVGIASVDCVQIFSLLGLVPQLACSLMPICEVFGSCVPNTSWTLTTGEEISAHAVFSNAFIVLLKLWRFNHPPLEHGVGDVPTVGSQLTPEYLLSVRNSLLVSSGNTFKDRNKRRLSAVASSSSPQAVFVDSFPKLKAWYRQHQACIASTLSGLVHGTPVHQIVDGLLNMMFRKINRGSQSLTSATSGSSSSSGPGTEDNSLRPKLPAWDILEAVPFVVDAALTACAHGTLSPRELATGLKDLADFLPASLAGIVSYFSAEVTRGIWKPAFMNGTDWPSPAANLSNVEQQIKKILAATGVDVPSLAAGGTSPATLPLPLAAFVSLTITYKIDKASERFLNLAGPTLEILAAGCPWPCMPIVASLWTQKAKRWSDFLIFSASRTVFLHNSDAVVQLLKSCFAATLGLNATPVSSNGGVGTLLGHGFGTHFCGGMSPVAPGILYLRVYRSMRDIVFMTEKIVAVLMHSVREIASSGLPRERSEKLKKTKNGVRYGQVSLAAAMTRVKLAASLGASLVWLTGGLVLVQSLIKETLPSWFISNHRSENEQGSEGMVAMLGGYALAYFTVLCGAFAWGVDSLSAASKRRPKVLGTHLEFLASALDGKISLGCDDAMWRAYVSGFVSLMVGCTPNWVLEVDVDVLKRLSNGLKQWNEVELALALLGVGAMGAAAELIVENEN
Length1285
PositionTail
OrganismMorus notabilis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus.
Aromaticity0.07
Grand average of hydropathy0.247
Instability index40.30
Isoelectric point6.12
Molecular weight138499.50
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33911
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     602.31|     154|     161|     956|    1113|       1
---------------------------------------------------------------------------
  753-  902 (141.09/67.39)	......................Q....ACIASTLsGLvHGTPVHQivDGLLNMMFrkinrgSQSLTSATSGSSSSSG.PGTEdnSLRPKLPA.WDIL.....EAVPFVVDAALTACAHGTLsPRELATGLKDLAD....FLPASLAgivsyfsAEVTRGiwkPA...FMNGTDW..PSPAANLSNVEQQIKK.
  917-  981 (74.36/31.76)	......................................................................GGTSPATlP..L..PLAAFVSL..TIT..YKIDKA...................................SERFLN.......LAGPTL...EI...LAAGCPW..PCMPIVASLWTQKAKRW
  984- 1144 (236.89/126.05)	FLifSASRTVFLHNSDAVVQLLK....SCFAATL.GL.NATPVSS..NGGVGTLL......GHGFGTHFCGGMSPVA.PGIL..YLRVYRSM.RDIV..FMTEKIVAVLMHSVREIASSGL.PRERSEKLKKTKNGVR.YGQVSLA.......AAMTRV...KLaasLGASLVWltGGLVLVQSLIKETLPSW
 1145- 1270 (149.97/70.43)	FI..SNHRSENEQGSEGMVAMLGgyalAYFTVLC.GA.FAWGVDS..LSAASKRR......PKVLGTHL.EFLASAL.DGKI..SLGCDDAMwRAYVsgFVS.LMVGCTPNWVLEV.........DVDVLKRLSNGLKqWNEVELA.......LALLGV..................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     188.27|      60|     168|     107|     169|       2
---------------------------------------------------------------------------
  107-  169 (101.51/67.64)	FGLPASEPGvFVVEFIFSMAWQLLDASLDD..EGL.LNLT..LEQNSKWVTKPQdvEIDG...HGGYGEKW
  269-  336 (86.75/48.86)	FGSLASSAG.LCHGASRSALWLPLDLVLEDamDGYqVEATsaIERISGLIKTLQ..AINGttwHDTFLGLW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     198.30|      64|     167|     420|     498|       3
---------------------------------------------------------------------------
  420-  475 (66.47/46.55)	.....................LLEPP..............qsvvsvanqaAAKAMLFISGIGVGNA..YFECLSVEDMPINCSGNMRHLIVEA
  476-  558 (74.93/44.98)	CIARNLLDTSAYFWPGYV........ngrisqipqgvpaqfpgwssflngAALAPLMISALASSPAssLAELEKVFEIAIKGSDDER..ISAA
  562-  600 (56.90/27.37)	CGASLIQGWNIQEHTAHFiirLLSPP...................................................VPADCSGADSHLI...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.39|      20|      71|     660|     680|       4
---------------------------------------------------------------------------
  660-  680 (33.05/24.52)	SAHAVFSNAFiVLLKLWRFNH
  733-  752 (39.34/24.73)	SPQAVFVDSF.PKLKAWYRQH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33911 with Med33 domain of Kingdom Viridiplantae
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