<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33899

Description Heat shock 70 kDa protein 4
SequenceMAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDIKLWPFKVIAGPGDKPMIVVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVDDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVSPLSQGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTVKDEKISSKLSPSDKKKIEDAIDGAIQWLDGNQLAEADEFEDKMKELESICNPIIAKMYQGAGGPDVGGAGMDEDDVPPAGGSGAGPKIEEVD
Length651
PositionUnknown
OrganismMorus notabilis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus.
Aromaticity0.06
Grand average of hydropathy-0.419
Instability index35.17
Isoelectric point5.07
Molecular weight71197.76
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33899
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     302.06|     100|     278|     188|     330|       1
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  228-  330 (156.98/187.05)	TAGDTHLGGEDFDnRMVNHfVQEFK...RKHKKDISGNpRALR....RLRTAC..ERAKRTLSSTAQTTIE..IDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDA
  510-  620 (145.08/90.04)	TNDKGRLSKEEIE.KMVQE.AEKYKaedEEHKKKVDAK.NALEnyayNMRNTVkdEKISSKLSPSDKKKIEdaIDGAIQWLDGNQLAEADEFEDKMKELESICNPIIAKMYQGA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     150.09|      52|     189|     170|     225|       2
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  170-  225 (75.34/74.80)	GLNVMRIINePTaAAIAYGLDKKATSV.GEKNVLIFDLggGTFDVSLLT..IEE..GIFEV
  362-  418 (74.75/56.07)	GKELCKSIN.PD.EAVAYGAAVQAAILsGEGNEKVQDL..LLLDVSPLSqgLETagGVMTV
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.19|      18|      21|      38|      55|       3
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   16-   33 (19.09/ 8.45)	....TTYSCVGVWQHDRveIIA
   38-   55 (32.57/18.54)	NR..TTPSYVAFTDSER..LIG
   60-   78 (24.54/12.53)	NQvaMNPTNTVF.DAKR..LIG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.46|      20|     293|     332|     354|       4
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  332-  354 (31.58/24.77)	MDKssvDDVVLVGGSTRIPKVQQ
  630-  649 (38.88/22.73)	MDE...DDVPPAGGSGAGPKIEE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.78|      34|      45|     427|     461|       5
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  427-  461 (52.33/41.00)	PTKKEQVFSTYSDNQPGVLiQVYEGERARTRDNNL
  474-  507 (56.45/39.41)	PRGVPQITVCFDIDANGIL.NVSAEDKTTGQKNKI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33899 with Med37 domain of Kingdom Viridiplantae
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