<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33897

Description Heat shock cognate 70 kDa protein
SequenceMASKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFSDPSVQSDMTHWPFKVVPGPGDKPMIVVHYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQSVKSAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINDPTAAAIAYGLDKKASSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYSTITRARFEEMNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILTGEGNQKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPAKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIERMVQEAEKYKAEDEQVKKKVEARNALENYAYSVKNTIKDEKIGGKLAAAEKEKIEKAVEETTEWVERNQLAEVDEFEDKLKELKGLCNPIIAKTYGQGSGPGGMGSGSGQPTSGGSGSGSGPTIEEVD
Length650
PositionUnknown
OrganismMorus notabilis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus.
Aromaticity0.06
Grand average of hydropathy-0.423
Instability index32.69
Isoelectric point5.46
Molecular weight70906.42
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33897
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.91|      50|      74|     412|     466|       1
---------------------------------------------------------------------------
  412-  466 (74.44/60.41)	AGGVMTVLIPRNTTipAKKEQIFSTysdNQPGVLIQ......VYEGERARTKDNNLLGKFE
  488-  543 (73.47/45.16)	ANGILNVSAEDKTA..GVKNKITIT...NDKGRLSKeeiermVQEAEKYKAEDEQVKKKVE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      75.85|      18|      21|      38|      55|       2
---------------------------------------------------------------------------
   16-   33 (18.49/10.42)	....TTYSCVGVWQNDRveIIA
   38-   55 (32.65/24.18)	NR..TTPSYVAFTDTER..LIG
   60-   78 (24.72/16.47)	NQvaMNPQNTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.69|      18|      41|     337|     356|       3
---------------------------------------------------------------------------
  337-  356 (25.60/26.66)	VHDVVLVGGSTRipKVQQLL
  381-  398 (30.10/22.07)	VQAAILTGEGNQ..KVQDLL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33897 with Med37 domain of Kingdom Viridiplantae
Unable to open file!