<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33890

Description Heat shock 70 kDa protein
SequenceMASKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRRFSDPSVQGDMLHWPFKVVAGPGDKPMIVVHYKGEEKQFAAEEISSMVLTKMKEIAEAYLGQSVKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKASSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGTDFYSTITRARFEEMNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILTGEGNQKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPAKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIERMVQEAENYKAEDEEVKKKVEAKNSLENYAYNMRNTIRDEKFAGKLEPADKQKIEKAIDEAIEWLDRNQLAEVDELEDKLKELEGLCNPIIAKMYQGGAGGDVPMGGGAEMPNGGYGKASSGGSGAGPKIEEVD
Length656
PositionUnknown
OrganismMorus notabilis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus.
Aromaticity0.06
Grand average of hydropathy-0.416
Instability index34.97
Isoelectric point5.26
Molecular weight71732.38
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33890
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      75.01|      18|      21|      38|      55|       1
---------------------------------------------------------------------------
   16-   33 (18.49/ 9.55)	..T..TYSCVGVWQNDRveIIA
   38-   55 (32.65/22.08)	NRT..TPSYVAFTDTER..LIG
   60-   78 (23.87/14.31)	NQValNPQNTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.83|      40|     397|      99|     147|       2
---------------------------------------------------------------------------
   99-  147 (50.22/55.21)	AGPGDKpMIVVHYKGeekQFAAEEISSMVltkmKEiAEAYLGQS..VKNAV
  501-  542 (62.61/38.31)	AGVKNK.ITITNDKG...RLSKEEIERMV....QE.AENYKAEDeeVKKKV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.36|      14|      14|     618|     631|       8
---------------------------------------------------------------------------
  618-  631 (27.89/16.97)	QGGAGGDVPMGGGA
  635-  648 (26.47/15.69)	NGGYGKASSGGSGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.28|      22|      44|     424|     445|       9
---------------------------------------------------------------------------
  424-  445 (39.20/25.92)	TTI.PAKK..EQIFSTYSDNQPGVL
  468-  492 (32.08/19.93)	TGIpPAPRgvPQINVCFDIDANGIL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33890 with Med37 domain of Kingdom Viridiplantae
Unable to open file!