<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33889

Description Uncharacterized protein
SequenceMAPAKKMDEIAVEVREEVQRDLETMKGELQEAFREDLKKIPKLEKSLEMVIGKLGELLRQREASTPGSTASGKELPSNPTMTPGGLNGRNGGPFDTAGRQEAYDGGGFGGPSYVRILVESHIAKLAFGDEFYPRVITIGIRVCSSSDPRCGRGDLERGDLERPEWAIQSGPPWTSVSEAWGYVRILVESHIAKMFTSVQNGNQSQPNMDCQRHCILISASNPHPLSTPVFRPQVQNLEQSENIDGQTENRLSDTETIAKSFAQCLVSLSVISPKQLPKLRAIYNVGKRNPRANDPPIDNAKNPYFLVLLSENFLEARAALRVPSLPSNQSPVKMDMASVPSVTGPPPTSMPSVNGSVMNRQPISVGNMPPATVKVNGFDLINKSSGAKYCKFHGFWTHFSTHSLCCSCCFPRSPVADFFTIFCSQDMISNNENGPDLKPIVSSISQPLRPVGPAPANVNILNNLLAKHQVINSAALPMGQTPIGMHMSNMISNGMASSTPAQNILPSGQPAITSLPGSGPLTQVTQTPGLSTFSAATSNVSGNSNIGVSQPMNNLQGGVSMGQSVPTMSQGNISGAQMVQTGMGMNQNMISGLGQSVVSSGTGTMMPTPGMSQQVQSGMQPLGVNNNSAASIPMSQQASTAPQASKYVKVWEGNLSGQRQGQPVFITRLEGYRNATASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGSLSFGSRALDLGMTRRTDGHEKEKTEGPREEFQKELEGIREDLKKIPRLEQGMELLLERMDLLMRQRDLGNMEPPWAAEGTTADPPAPREDLHREGGIRAELCTRRVEMPVFDGENPDGWSIRAERYFAMNKMTEREKLDVAVVSLEGEALAWFQWEDGRSPIRSWMVLKLMLLERFRPMQEGSLCEKFLSLRQETTVRDYRRQFEILAAPLTELSEQVLESTFVKGLKPEIRAEIRLMKPERLGRIMEVAQRVEERNQSVCGPRVTGPQGPQIFFLE
Length1038
PositionUnknown
OrganismMorus notabilis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus.
Aromaticity0.06
Grand average of hydropathy-0.379
Instability index47.42
Isoelectric point7.51
Molecular weight113864.86
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33889
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.99|      14|      67|     113|     127|       1
---------------------------------------------------------------------------
  113-  127 (23.88/22.71)	YVRILVESHIAKLaF
  182-  195 (29.11/22.05)	YVRILVESHIAKM.F
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     180.57|      36|      80|     517|     552|       3
---------------------------------------------------------------------------
  445-  470 (37.54/18.94)	.SQPLRPVGPAP.............ANVNILNNLLAKHQV
  474-  500 (25.24/ 9.99)	AALPM...GQTPiGmhMSnMISNGM.........ASSTP.
  517-  552 (61.46/36.36)	GSGPLTQVTQTP.G..LS.TFSAATSNVSGNSNIGVSQPM
  601-  634 (56.33/32.62)	GTGTM...MPTP.G..MSqQVQSGMQPLGVNNNSAASIPM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.88|      12|      16|     744|     756|       4
---------------------------------------------------------------------------
  744-  756 (17.59/16.65)	LSVSDKACRLiGM
  762-  773 (20.29/13.01)	LSFGSRALDL.GM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.07|      13|      14|      55|      67|       5
---------------------------------------------------------------------------
   55-   67 (22.87/11.45)	GELLRQREASTPG
   72-   84 (25.20/13.37)	GKELPSNPTMTPG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     106.39|      32|     763|      15|      54|       6
---------------------------------------------------------------------------
   15-   54 (48.74/48.84)	REEVQRDLetmkgelqEAFREDLKKIPKLEKSLEMVIGKL
  789-  820 (57.65/38.68)	REEFQKEL........EGIREDLKKIPRLEQGMELLLERM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.30|      20|      22|     339|     360|       7
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  339-  360 (28.64/22.31)	VpSVTGPPPTSMpSVNG.SVMNR
  363-  383 (31.66/14.69)	I.SVGNMPPATV.KVNGfDLINK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.53|      10|      16|     392|     407|      10
---------------------------------------------------------------------------
  392-  407 (18.80/28.70)	F.....HGFWTHFsthslcCS
  410-  424 (15.73/ 7.68)	FprspvADFFTIF......CS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33889 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ASSTPAQNILPSGQPAITSLPGSGPLTQVTQTPGLSTFSAATSNVSGNSNIGVSQPMNNLQGGVSMGQSVPTMSQGNISGAQMVQT
2) ISGLGQSVVSSGTGTMMPTPGMSQQVQSGMQPLGVNNNSAASIPMSQQA
3) LRQREASTPGSTASGKELPSNPTMTPGGLNGRNGGPFDTAGRQEAY
4) MAPAKKMDEIAVEVREEVQRDLETMKGELQE
5) SPVKMDMASVPSVTGPPPTSMPSVNGSVMNRQ
496
590
58
1
330
581
638
103
31
361










Molecular Recognition Features






MoRF SequenceStartStop




NANANA