<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33886

Description Heat shock 70 kDa protein
SequenceMATKSEKAIGIDLGTTYSCVGAWVNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQADMKLWPFKVIPGPGGKPMIVVTYKGEEKQFSPEEISSMVLIKMREIAEAFLGQQIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKASRKGEQTVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVAEFRRKHKKDMSGNARALRRLRTACERAKRALSSTTQTTIEIDSLYEGIDFYATITRARLEELCMDLFRKCMEPVEKCLRDAKIDKSQVDEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQVNVMFDIDANGILNVTAEDKTAGVKNKITITNDKGRLSKEDIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTVRDEKFAGKLRPEDKEKIEKAVDETIEWLERNQLAEVDELEDKVKELESVCNPIIAKMYQSSGAGGDVPMGDDYGGGAGGGGSGASGAGPKIEEVD
Length653
PositionUnknown
OrganismMorus notabilis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Moraceae> Morus.
Aromaticity0.06
Grand average of hydropathy-0.407
Instability index35.37
Isoelectric point5.21
Molecular weight71659.60
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33886
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     356.72|     134|     260|     120|     277|       1
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   50-  118 (41.90/11.04)	ERLIGDAAKNQVAMNPqnTVF.DAKRLIGRrfsDPSVQADMKLwpFKVIPGPGGKPmivVTYkGEEKQFS...........................................................................................
  135-  276 (206.01/159.86)	EAFLGQQIKNAVVTVP..AYFnDSQRQATK...DAGVIAGLNV..MRIINEPTAAA...IAY.GLDKKASRKGEQTVLIFDLGG......GTFDVS.LLTIE.EGIFEVkaTAGDTHLGgedFDNRMVnhFVAEFRRKHKKDMSGNARALRRLRTACERAK
  439-  538 (108.80/57.87)	.................................................NQPGVLI...QVYeGE..RARTKDNNLLGKFELTGippaprGVPQVNvMFDIDaNGILNV..TAEDKTAG...VKNKIT..ITNDKGRLSKEDIEKMVKDAERYKAEDEEVK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.87|      18|      41|     336|     355|       2
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  336-  355 (25.88/24.78)	VDEVV..........LVGGSTRipKVQQLL
  370-  397 (23.98/14.60)	PDEAVaygaavqaaiLSGEGNE..KVQDLL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.72|      26|      27|     570|     595|       3
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  570-  595 (42.48/23.09)	EDKEK.IEKAVDETIEWLERNQLAEVD
  598-  624 (40.24/21.56)	EDKVKeLESVCNPIIAKMYQSSGAGGD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33886 with Med37 domain of Kingdom Viridiplantae
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