<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33824

Description Uncharacterized protein
SequenceMPKSSTLSLAMRGKPKDNGGSAPLSPRSPRSPEMPDKFDFAAPNAAFHNMPQSPASPKPRKDSKSIFANFSANKSSSRLNNSHGNSSRQLHEQQSSPTLYSNGRSGASTPDLGRPVRTPNSDDASSEVVRLDQRAPSALSNDSDLHTDPSKRNNSKPKKQGILSRSKSIKEGEGSGSRGKLNKVPPGQLSPDVAGSWTTNGDGTPLKPTAMDKGQSWRQMGKGKMRTHSTERQEAPKPIPQHDDAGSRRDKSEQLSVASNSFNENKGHGFIFKLGSGARNMGEKMDSARKGVFGKLARSSSNHETQTPVMNEPYVCKIIHKPLIEQTRLTRISTRLEQSRDKTEFWMPALPWRCIDYLNMRGCEEEGLYRVPGSAQQVRYYERKFDEDRDIDLISDPNLNDPNVIGSLFKNWLRQLPDEIFPKAIQAAIQQECQGAKTTPQMLKDELSKLPPFNYYLLFAITCHISLLHSCSEFNKMNYNNLCICFQPAIKIDAFCFQFLILDWRNCWQGCWTEKDFLTEEINFLNSLEAENQQQQQLQQQQQQQQQQQQQQQQQEKSSKNGLGKSKGGNSSNQKPSTKRSQSTDYIKPSSRGISSDRNGRATPPNPPPVLTEPASNPVLRMGGGGYNEREMSPERLTSSSDSREGVPHKRGVPRAPPSVSTEASSVDLDENTTPTQANHMRDHSESTQFRLDLRDPPGSPFNIKF
Length706
PositionTail
OrganismBipolaris oryzae ATCC 44560
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Pleosporomycetidae> Pleosporales> Pleosporineae> Pleosporaceae> Bipolaris.
Aromaticity0.06
Grand average of hydropathy-0.997
Instability index61.86
Isoelectric point9.29
Molecular weight78772.91
Publications
PubMed=23357949

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process
signal transduction	GO:0007165	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33824
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.16|      18|      19|      73|      90|       1
---------------------------------------------------------------------------
   73-   90 (32.05/16.00)	NKSSSRL..NNSHGNSSRQL
   93-  112 (26.11/11.66)	QQSSPTLysNGRSGASTPDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.76|      18|      22|      26|      47|       2
---------------------------------------------------------------------------
   26-   45 (28.59/23.78)	PRSPRSPEmPDKfD....FAAPNA
   51-   72 (31.17/10.74)	PQSPASPK.PRK.DsksiFANFSA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.97|      16|      21|     186|     203|       3
---------------------------------------------------------------------------
  186-  203 (27.65/19.24)	PgqLSP...DVAGSWTTNGDG
  205-  223 (28.33/13.43)	P..LKPtamDKGQSWRQMGKG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      33.41|      12|      21|     266|     280|       4
---------------------------------------------------------------------------
  266-  280 (16.80/21.41)	KGhgfIF.KLGSGARN
  290-  302 (16.61/ 8.80)	KG...VFgKLARSSSN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.27|      22|      22|     453|     474|       5
---------------------------------------------------------------------------
  453-  474 (41.13/35.10)	FNY.YLLFAITCHISLLHSCSEF
  477-  499 (39.15/33.02)	MNYnNLCICFQPAIKIDAFCFQF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      71.94|      16|     430|     149|     164|       6
---------------------------------------------------------------------------
  149-  164 (26.82/11.12)	PSKRNNSKPKKQGILS
  598-  612 (23.17/ 8.58)	RNGR.ATPPNPPPVLT
  624-  639 (21.96/ 7.73)	GGGYNEREMSPERLTS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33824 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EAENQQQQQLQQQQQQQQQQQQQQQQQEKSSKNGLGKSKGGNSSNQKPSTKRSQSTDYIKPSSRGISSDRNGRATPPNPPPVLTEPASNPVLRMGGGGYNEREMSPERLTSSSDSREGVPHKRGVPRAPPSVSTEASSVDLDENTTPTQANHMRDHSESTQFRLDLRDPPGSPFNIKF
2) FKLGSGARNMGEKMDSARKGVFGKLARSSSNHETQTPVMN
3) MPKSSTLSLAMRGKPKDNGGSAPLSPRSPRSPEMPDKFDFAAPNAAFHNMPQSPASPKPRKDSKSIFANFSANKSSSRLNNSHGNSSRQLHEQQSSPTLYSNGRSGASTPDLGRPVRTPNSDDASSEVVRLDQRAPSALSNDSDLHTDPSKRNNSKPKKQGILSRSKSIKEGEGSGSRGKLNKVPPGQLSPDVAGSWTTNGDGTPLKPTAMDKGQSWRQMGKGKMRTHSTERQEAPKPIPQHDDAGSRRDKSEQLSVASN
529
272
1
706
311
260










Molecular Recognition Features






MoRF SequenceStartStop




1) MPKSSTLSLAMR
1
12