<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33763

Description Uncharacterized protein
SequenceMSGIVNPAVQFSKPVVEKPEGVYPLNGDDPFAGPPSSATGTSQTSASSNSKQYIYPDFKVWQHTQDDDIRMRNYLQKGYFEPPLVSNEFLSARTTMTTLLHSETATRPTTSATAGSFDGIEHSSSGDTGISSNGASITAPSTAPTSGTPVPTSGNNPNVKLVALSEFMIKAINQRRNLSKIRAKTTYKPPPRVTLTDNKKEKWIENLADSKVSLKQLSRAIPHGIRNRVLLEQCSQNSVPIPRALWLIRCVSTNEQRQLKRKGTAGNAAALTNNWIIEWTEQVTLYIEKVAENCFNPNANANWRTRLTYITRLSAHLYMEALLNQETFLAWVVRSLGRFVNSSVETSLSTAKTSLLDFKYLSTHVIFLRLFWFKIIKVDYLSKELAELLLRISSALTDTIAATKSHPNTSRKDIHEPANKLLSSINFFITYLFYYNSDSFIIPTTWVHLKSALKKVIDMNNTAISEQFKLVSYRNESLMIDLPADDESNQNLGTSSVIIWKLDNFERPDVGIPGLSDMVFYSTRDGNDSNESWKKNLKLMLEWSVTGYRCSDIKRVSLVVSILQWRLLQIAQNGRGKKYKAMKLELEVEILDFIYALNDRVKFDLPQLLPMSPLSDVDNLRNDINFENVFVLVSELYYHDLFVVSSYVRRLIASGVIYLQDANLACGFHTLILKSLPTLSDTNVNNILKGLTSVKFPGSESDALVKEVRHKVFLYLNSRKQDTGTLNSPAISIEPRMDQNFNLVDALELTDQLEIGMRFILAKESSQKLYDLVTQCSGTSNKIRLSLSDVSSLYRLFEKMYNLHLFLDMMVSSLDMYGDCFEIDLWTVNFIISIVFSNHDILARRVASNTELYPSALEEKVARILSMASKYDGMFKSIDTRPIQDTYLQSEDVKRDLKVFRNEQKQNATQTEKAELSKLPLEPLQALGINSAERLLNPSEFSQHVIQVISHYWSIVRSGDRSTRLDLSRLLKALKSAKQSEFSSILNQHIRKTIAPTLSIEFDVNVKFIARLIVDQILSFEDACEAFAPHTNDDNLDASSGQRLVWSLLLNTNRYEKSAFSLEACESIVFELARKDFQEKKVDEYVSLLIRNCRVHSGMSSMVGDLANIDESAHTPGVVDQHREHQSALSASVDHLPTPVSNSMTTPLPMVTSPMVVDDLGGNLTEIAEPCREELIRVLRVMAVKDTSKTLKWVQSEYSNGQGISKPQLIELFNQMLVDEAPVTQAKDTNRLVGVLSYFNLPICQSLVKMIFDEEFKHSSNDEEQSSYLSEIISSVLIEAVKWDTNDYWKDDVSLLGDLFKFVAPPLKLKLLHCCEEILLGSDVFPKVVIGEARSNVSVIPLLGSMISSCSKFSYIDGPGSGRFKPGFIPLSDSLVFSLNLSLEKLMYYCQKSQLQKSMSKPKSTGGIDTESSSSSDSEGDEEIDTSIALLARIILIHKGFLVDLVMKRSINLQTDVFLQNLTKLFTMEIIDSSFKLKNLLYDILLSIKMLISESLSTNPSTISSTRLQQSSNAPTAMPSTTTNVSSGMSPFPPFGRASHTPTGSQSFLSPATPTVSRFNTASYTTHPTGVTATTGSIMSIVPPSYNNKLRYLLKDISLKDGLIALDNVQNLFVFDSKTESYRKFYTKPFDLLEDSSPVVGTNDSSISLQLFQASVEKKNPS
Length1662
PositionKinase
OrganismKuraishia capsulata CBS 1993
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Saccharomycetales incertae sedis> Kuraishia.
Aromaticity0.08
Grand average of hydropathy-0.190
Instability index39.17
Isoelectric point6.33
Molecular weight186162.25
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33763
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.85|      19|     109|    1468|    1486|       1
---------------------------------------------------------------------------
 1468- 1486 (33.52/20.72)	MEIIDSSF..KLKNLLYDILL
 1579- 1599 (30.33/18.00)	MSIVPPSYnnKLRYLLKDISL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     169.90|      58|     109|     836|     900|       2
---------------------------------------------------------------------------
  836-  900 (90.65/76.90)	FSNHDI........LARRVASNTELypsaleeKVARIL.SMASKYDGMFKSIDTRPIQDTYLQSEDVKRDLKV.F
  941- 1008 (79.25/52.79)	FSQHVIqvishywsIVRSGDRSTRL.......DLSRLLkALKSAKQSEFSSILNQHIRKTIAPTLSIEFDVNVkF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     161.34|      49|     109|      30|      85|       3
---------------------------------------------------------------------------
   30-   85 (80.51/61.33)	PFAGPPSSATGTsqtsaSSNSKQYIYPDFKVWQHTQDDDI.RMRNylQKGYFEPPLV
  144-  193 (80.84/46.17)	PTSGTPVPTSGN.....NPNVKLVALSEFMIKAINQRRNLsKIRA..KTTYKPPPRV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.50|      38|     110|     314|     362|       7
---------------------------------------------------------------------------
   91-  137 (54.14/27.52)	SARTTMTTLLHSET....ATRPTtsataGSFdgieHSSSGDTGISSNGASI
  314-  355 (55.36/39.55)	SAHLYMEALLNQETflawVVRSL.....GRF....VNSSVETSLSTAKTSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     132.00|      46|     219|     505|     605|       9
---------------------------------------------------------------------------
  549-  605 (60.32/32.83)	RCSDIK...RVSLV.VSILqWRLLQiaqngrgKKYK.AMKLELEVEILDfIYalNDRVKFDL
  775-  825 (71.68/46.40)	QCSGTSnkiRLSLSdVSSL.YRLFE.......KMYNlHLFLDMMVSSLD.MY..GDCFEIDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      92.44|      28|      41|    1321|    1361|      14
---------------------------------------------------------------------------
 1325- 1352 (47.13/54.65)	FPKVVIGEARSNVSVIPL.LGSMISSCSK
 1364- 1392 (45.31/18.91)	FKPGFIPLSDSLVFSLNLsLEKLMYYCQK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.05|      17|      39|    1101|    1121|      16
---------------------------------------------------------------------------
 1101- 1121 (24.87/25.70)	SMVGDLANIDesahTPGVVDQ
 1143- 1159 (32.18/20.75)	SMTTPLPMVT....SPMVVDD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33763 with Med12 domain of Kingdom Fungi
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