<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33614

Description Uncharacterized protein
SequenceMDAKSISRFTNVPPSGQAERDLPKRVCGCIRTQSGDKGSWENGLSYECRSLLFKALHNVIERCLLSRDVVRLGKWFVQPSTNSERAIGKSSLHPSFSYAFFVHGDSTVCASMDIREHPPVRPLTMQHLEEALAHQSVPSGSGNGGNNSGTGGLVPAGPNTTPSVTGQNGNQPGASVAGEDAANGGTVSVNATVSKPRSVILAPFGLAGTLTGQSYKANDPQTQKLLDDWSAFYPISNKSVSLSADSADAVPPIVEIMIGGVKMRYPSKYVLVTDMDDWSPPANDSCSTDAAAKTGASTTGAAATVNGPSNNQTTAATTTTATAAAAAASALTAASVKREPTIDAKSERSSSTVGVGGSGGPTSSSSVNSGNNQIGAIATGSSSKDLNGSADGTGSARSLQQHQQPRHHKSMMTPPLTVPESPSNDLGNPYSMSSALINKSAAVILPERVWQDCIMHAPGASAPPTSGSGTAPAAATAATMTSIGPIKVEPKDTSGAATGGTGGDENSSAAANGVDANGNSSVWEISNPTTKVYCSCIKCRTKGPPNISSSSASSASSLSSCSINAGRSQQQHVLMGGGGSSVVAAASLFSSSLSPPSNSPVGSKSLANSSSHSAATGARGSKDYHHHHNHHSHSHHHHSSRPPKIPFHKRPPQESLFRPGSMLTSLSTGATASSSPGVAAADADVLELADSCLRSNQKCSTNTSSASVGGSANAGSNAPGSTTPYGGPPSYCRNPLSIGDSHPLPSEGSPASAAPSPMQPSSVSQPTSVPSGDQLITLSPHPPASNNPRSVQPGTPSCLDHLDKNTPAPTPTDQHDSKSITASPYHTPSHPGGSGPGGTGGSGGGGGGGSGALSEQQQQNQQQNQSQTGAAAGSSNNSASSSTSSSCNSTASTHSSLKASPRNAAGGSTGLKVRSDMSLGASSSSVAATSIAGSGVGGVPMTPSIHSVYSTAHQTAVANNLASKRESILQMLQSLKRPSLYCKDYETLQSEDIPSTSQLLYDYTSVDAWMNHPVKRMRFAPEETRLVRQIRNLDLYANERTSFGGGSGLAGGCNSLLMRGLESGTEGLSNHHLHGGVASGGAGGCGDMTASNGATGAQSSATGGLLGLGQIKMELGCDGSGGGGGGGNTPNGTAGGGDRVNGSGGSTGGGNGGDTLLGEHEIKKEKEDKAGGGGYSLLTDQDLQPSIDDLNQIFDDGGPFNDDADMHNTPPGSNKSSSGSGNGFSEEGKRYPHSNHHHGVNTGMLSPKELSQMFPTPPSLDPHPNSSPGGGGCLSDGGIVIDTMVDLQMSLSSGGIGGIGGGGGGGGSPQEEPIDDWSFVFLPPAVCPYVGSSKYAPLANLPSQLAPPPVGPPGANLVYKSTRQKQKEKAAEREQKQKQLREHQERDANGGDQQQQQQQQDGHSNVPVSTTPSVPASVGSGTTGISSLLGTPAGLVGSGLLPMLKQEPSLMVPQPLSTPNSLLGGLNGSASHPYSNPPSQGAQSQQLSRPSSVNSLPGGIVGGGGGAGMMSPSPTGAAGGSGGGGLFHPTMGGIPVPLRQGMSPISPATPGGSMRVPTPGVPLPYPSPLGGAAAGSPNPMAFRRATPLLPPPPYDVAIASPANSSYHTKQFPLDDAGRPGSRGPLTPSGGALGPGSNAVGMAGMTPGGVGGPSTVNGFGAVVVLPDWATMQPLAMERKLLLVLVVVG
Length1687
PositionMiddle
OrganismAnopheles darlingi (Mosquito)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.03
Grand average of hydropathy-0.435
Instability index54.69
Isoelectric point6.69
Molecular weight169509.77
Publications
PubMed=20920257
PubMed=23761445

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33614
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     119.66|      31|      31|    1434|    1464|       1
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  756-  788 (34.86/ 6.71)	SPMQPSSVSQPTSVPSGdqLITLSPH..PPAS......NNP
 1449- 1478 (49.38/13.32)	SLMVPQPLSTPNSLLGG..LNGSASH..PY.S......NPP
 1618- 1652 (35.42/ 6.97)	RPGSRGPL.TPS...GG..ALGPGSNavGMAGmtpggvGGP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|    1802.48|     415|     455|     398|     851|       2
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  136-  328 (208.00/36.35)	.............................................................................................................................................................SVP..S..GSGNGGNNSGTGGLVPAGP......NTTPSVTG.QNGNQPGASVA..GEDaANG............GT....................................................VSVNATVSKPRSVILAPFG....LAGTLTGQSYK..ANDPQTQ....KLLDDW.............................................SAFYPISNKSvS.LSADSADAVP....P.IVEIM..........................................IGGVkmrypskyvlvTDMDDWSPPANDSCSTDA...........AAKTG..ASTT.GAAATVNGPSN...NQTTAATT....TTATAAA.AAA
  329-  755 (668.89/134.87)	SALTAASV....KREPTIDAKSE.RSSSTVgvggSGGPTSSSSVNSGNnqiGAIATGSSSkdlNGSADGTG....sarSLQQH......QQPRHHKSMM.TPPL......TVPESPSNDLGNPYSMSSAL...INKSAAVILPERVWQDCIMHAPGASAPPTS..GSGTAPAAATAATMTSIGPIKVEPKDTSGAATG.GTGGDENSSAAANGVD.ANGNSSVWEI..SNPTTKVYCSCIKCRTKGPPNISSSS......................ASSASSLSSCSINAGRSQQQHVLMGGGGSSVVAAASLFSSSLSPPSNSPVGS....KSLANSSSHSAATGARGSKDYHHHHNHHSHSHHHHSSRPPKiPFHKRPPQESLFRPGSMLT.S.LSTGATASSS....P.GVAAA..........................................DADV...........LELADSCLRSNQKCSTNTSSASVG....GSANAG..SNAP.GSTTPYGGPPSYcrNPLSIGDSHPLPSEGSPAS.AAP
  792- 1172 (492.85/95.97)	QPGTPSCLDHLDKNTPAPTPTDQ.HDSKSI....TASPYHTPSHPGGS...GPGGTGGSG...GGGGGGSG.....alSEQQQ......QNQQQNQS.Q.TGAAagssnnSASSSTSSSCNSTASTHSSLkasPRNAAGGSTGLKVRSDMSLGASSSSVAATSiaGSG.............VGGVPMTPSIHSVYSTA.......HQTAVANNL..ASKRESILQMlqSLKRPSLYCK..DYETLQSEDIPSTSqllydytsvdawmnhpvkrmrfAPEETRLVRQIRNLDLYANERTSFGGG.S...........GLAG......GC....NSLLMRGLES...GTEGLSNHHLHGGVASGGAGG.....................CGDMTA.SnGATGAQSSAT....G.G.................................................L...........LGLGQ..IKMELGCDGSGGGGGGGntpnGTAGGG..DRVN.GSGGSTGGGNG...GDTLLGE.HEIKKEKEDKA.GG.
 1173- 1550 (432.74/83.18)	..GGYSLLTDQDLQ.PSIDDLNQiFDD........GGPFNDDADMHNT...PPGSNKSSS...GSGNGFSEegkryphSNHHHgvntgmLSPKELSQMFpTPPS......LDPH.PNSSPGGGGCLSDGG...IVIDTMVDLQMSL.............................................SSGGIGGiGGGGGGGGSPQEEPID...DWSFV..F..LPPA..V.CPYV...............................................................GSSKYAPLANLPSQLAPPPVGPPGAnlvyKSTRQKQKEKAAEREQKQKQLREHQERDANGGDQQQQQQQQ.DGHSNVPVST..TP.SVPA.S.VGSGTTGISSllgtPaGLVGSgllpmlkqepslmvpqplstpnsllgglngsashpysnppsqGAQS...........QQL......SRPSSVNSLPGGIVG....GGGGAGmmSPSPtGAAGGSGGGGLF..HPTMGGIPVPLRQGMSPISpATP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.44|      22|      27|    1554|    1578|       3
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 1554- 1578 (35.56/24.51)	M..RVPTPgvPLPyPSPLGGAAAGSPN
 1580- 1603 (38.88/16.64)	MafRRATP..LLP.PPPYDVAIASPAN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33614 with Med13 domain of Kingdom Metazoa
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