<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33585

Description Uncharacterized protein
SequenceMIISTIYYRSDPANSSVWLVAPLISKLPSSVQGRVLKQAGNILESVASTVSHQPLLSLVLTCLKGQDEQREGLLTSLQTQLTQFLQSPKDDRWEDPKSRRLMHEALQLRLSLVGNMFDTIMRSSLTWTTEFALLLLQLITTGTVDTHTNNELFTTVLDMLSVLINSTLSSDASGSPGAGEEKGRSHQALIKKLKKEVGDKHSDGINLVRQLLPVPRKTIEVITCEPMGSLIDTKGNKITGFDSIDKKQGLQVSAKQKINPWDTLEILKNPAPLSWAWFGGIRMERKPLMYQEQYRLTLYHSHNQILKNPAPLSWAWFGGIRMERKPLMYQEQYRLTLYHSHNQVKNDSHYFDPPQVPPDEEEPPPPINLEAEKPAQEMDTSQSDIKVGVVIPVEGSKETTNKKGKKRTNRKRPAPTPAQTPMREQPYPFNSGMSGYPDRNFVPSAMLPQGQVPFQQPLPPAGPIRPERPHMMPGSSKMVLKNHLIGARTAGPTAQSQPLLTQKLLRDQINRRRGPGGITPDSQMSSMVQPGNQYGNYNSMPMMGQQAGMTADPHTTGQPSSSMVGSGYNQPFSHPAQQGASQPQRMMPGMSQQQSGPNQMGYPPQQHQPMHATRARLQHQIHQHRQMHQGMQQPQQHPTGPAGQGTYMSHQMLPQDQQQQQQRGQQQLLQQQQQQQQQQQQQQRMMALRQQQQQMQGQVPMSGSSMIPGMQGQMGPGRPANTMNQRGHNTYTHY
Length734
PositionKinase
OrganismStrongylocentrotus purpuratus (Purple sea urchin)
KingdomMetazoa
Lineage
Aromaticity0.05
Grand average of hydropathy-0.796
Instability index61.24
Isoelectric point9.69
Molecular weight82367.80
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33585
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     265.29|      37|      37|     268|     304|       1
---------------------------------------------------------------------------
  268-  298 (60.95/26.37)	...................KNPAPLSWAWFGGIR..M...ERKPLMYQEQYRLTL
  299-  337 (77.17/35.19)	YHSHNQ...........ilKNPAPLSWAWFGGIR..M...ERKPLMYQEQYRLTL
  338-  363 (24.14/ 6.37)	YHSHNQ............vKNDS....HYFDPPQ..VppdEEEP...........
  411-  435 (29.79/ 9.44)	...................KRPAPT......PAQtpM...REQP..YPFNSGMSG
  436-  480 (48.32/19.51)	YPDRNFvpsamlpqgqvpfQQPLPPA....GPIR..P...ER.PHMMPGSSKMVL
  481-  506 (24.92/ 6.79)	...................KN..HLIGARTAGPT..A...QSQPLLTQKLLR...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.13|      18|      19|     651|     669|       2
---------------------------------------------------------------------------
  626-  648 (28.06/ 7.72)	QM.HQGMQQPQQHptgpaGQGTYM
  651-  669 (32.07/13.09)	QMlPQDQQQQQQR.....GQQQLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      87.52|      19|      19|     567|     585|       3
---------------------------------------------------------------------------
  568-  589 (31.68/10.24)	YN.....QPFSHPAQQGASQPQRmmpG
  590-  606 (29.29/ 8.90)	MS.....QQQSGPNQMGYP.PQQ....
  704-  727 (26.55/ 7.36)	SSmipgmQGQMGPGRPANTMNQR...G
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.27|      13|      19|     673|     685|       4
---------------------------------------------------------------------------
  673-  685 (25.84/10.11)	QQQQQQQQQQQRM
  689-  701 (26.43/10.51)	RQQQQQMQGQVPM
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     133.66|      46|      81|      73|     120|       5
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   73-  120 (75.71/49.99)	LLTSLQTQLTQFLQSP.KDDRWEDP.....KSRRlmHEALQLRL.SLVGNMF.DTI
  152-  205 (57.96/32.19)	LFTTVLDMLSVLINSTlSSDASGSPgageeKGRS..HQALIKKLkKEVGDKHsDGI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33585 with Med12 domain of Kingdom Metazoa
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