<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP33583

Description Uncharacterized protein
SequenceMPMIRAAWYLKMMAANQAAIQETKMKKRQPNDPSQANKSKGQVQSWFHDLAGNKSLTLLTKKVPVFHRKEDIFMTLCENNMPMIRAAWYLKMMAANQAAIQETKMKKRQPNDPSQDWCLIITKFLKSQLDKIVEYNNTASLVSAQQAASANTKQSSSSTTSSMLGGGMGSMGMGSGTMGGSTIELEKCVKLWQYTTELARYLYQEGMLECHDYLSWLVDTLEKVNTNDDSTLRFLLPFVVQYLEEFLKSQMLSRRLAYVCARRLMSMCSETRPHSPHLNTSSNVQLPPNTPPHSQHALASILAEFRSCPQHHSIILGLSCVLQAITLRCPSALVWINLGESKNYSVPGSPLDILPCPPSLLPLPGSVSMQNHQGHVSELYLVRPWISCRVRHPSCPFLAVFPCRTTRAMCLNCTWFALGYPAMSAVPPAPSWQCFHAESPGHTISRVLQTLEVLDRHCFDRCDASNSIDALYNKIFLNSQKQEAPEPLQSDDPIVLLLCQWAVCPERTSEHRALVVAQLLEKYVIDMEAEKMAEMEVMEDKEMAPISPMPTASTIPVFQVLLQHFLDIRAPVIDDTSSSADDKKAFANLILLFGELIRCEVFSHDSYMCTLISRGDLTTVPTQAQTGAFVGGPGSQRNDRGAGDKNEAKDDGEEKQDSSDNEDYGYLDDKPPPAPAPPPRKESTSFQEKFLESIQSKSDSQSDISDDEKDSPMDGEKSDEEKKSDMDYRSPSPEAPRVNRHQLYVKHFPISTEDSSAYHESNQRSVLLYGFGRARTEARQQVKHVQKDLLKILTQGGGKGEVSKGKKVSKLDEPTVNKEETMQRFLALCYFDQHMVTGSCANGVLDQVQAFSMGNRDTPPTFDQVTLVFELLENALNINGLLEFAVKVC
Length889
PositionKinase
OrganismStrongylocentrotus purpuratus (Purple sea urchin)
KingdomMetazoa
Lineage
Aromaticity0.07
Grand average of hydropathy-0.395
Instability index52.80
Isoelectric point5.95
Molecular weight99371.30
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP33583
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     156.94|      35|      78|       1|      35|       1
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    1-   35 (78.47/53.44)	MPMIRAAWYLKMMAANQAAIQETKMKKRQPNDPSQ
   81-  115 (78.47/53.44)	MPMIRAAWYLKMMAANQAAIQETKMKKRQPNDPSQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.70|      16|      18|     291|     308|       2
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  273-  288 (29.18/11.36)	PHSPHLNTSSNVQLPP
  292-  307 (27.52/17.08)	PHSQHALASILAEFRS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     306.66|      75|     193|     413|     487|       3
---------------------------------------------------------------------------
  413-  487 (137.68/87.11)	CTWFALGYPA.MSAVPPAPSWQCFHAE....SPG.HTISR.VLQTLEVLDRHCFD.RC...DASNSIDALYNKIFLNSQKQEAPEP
  516-  588 (69.47/40.18)	VAQLLEKYVIdMEAEKMAEMEVMEDKEmapiSPM.PTAST.I.PVFQVLLQHFLDiRApviDDTSS.SADDKKAFAN.........
  609-  677 (99.51/60.85)	CTLISRG..D.LTTVPTQAQTGAF.VG....GPGsQRNDRgAGDKNEAKD.DGEE.KQ...DSSDNED..YG..YLDDKPPPAPAP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.69|      21|     119|     123|     143|       4
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  123-  143 (35.17/25.38)	KFLKSQ.LDKIVEYNNTASLVS
  245-  266 (32.52/22.89)	EFLKSQmLSRRLAYVCARRLMS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.40|      21|     140|     350|     376|       5
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  327-  348 (34.77/22.42)	LRCPSALVWINlGESKNYSVPG
  354-  374 (40.63/23.11)	LPCPPSLLPLP.GSVSMQNHQG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.27|      15|      16|     375|     389|       7
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  375-  389 (29.85/15.80)	HVSELYL.VRPWISCR
  392-  407 (27.42/14.00)	HPSCPFLaVFPCRTTR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP33583 with Med12 domain of Kingdom Metazoa
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